Salmonella enterica subsp. enterica serovar Javiana: CFSAN001992_01955
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Entry
CFSAN001992_01955 CDS
T02479
Symbol
ruvB
Name
(GenBank) Holliday junction DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
senj
Salmonella enterica subsp. enterica serovar Javiana
Pathway
senj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
senj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CFSAN001992_01955 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
senj03400
]
CFSAN001992_01955 (ruvB)
Enzymes [BR:
senj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CFSAN001992_01955 (ruvB)
DNA repair and recombination proteins [BR:
senj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CFSAN001992_01955 (ruvB)
RecFOR pathway proteins
CFSAN001992_01955 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_22
Mg_chelatase
AAA_3
AAA_14
Rad17
AAA_16
nSTAND3
TIP49
AAA_2
AAA_18
RNA_helicase
AAA_17
NTPase_1
Bac_DnaA
AAA_28
NB-ARC
AAA_24
ABC_tran
TsaE
NPHP3_N
Sigma54_activ_2
Motif
Other DBs
NCBI-ProteinID:
AGF80716
LinkDB
All DBs
Position
363258..364268
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AA seq
336 aa
AA seq
DB search
MIEADRLISAGATIAEDVADRAIRPKFLAEYVGQPQVRSQMEIFIQAAKLRGDALDHLLI
FGPPGLGKTTLANIVANEMGVNLRTTSGPVLEKAGDLAAMLTNLEPHDVLFIDEIHRLSP
VVEEVLYPAMEDYQLDIMIGEGPAARSIKIDLPPFTLIGATTRAGSLTSPLRDRFGIVQR
LEFYQVPDLQHIVGRSARHMGLEMSDDGALEVARRARGTPRIANRLLRRVRDFAEVKHDG
AISAEIAAQALDMLNVDAEGFDYMDRKLLLAVIDKFFGGPVGLDNLAAAIGEERETIEDV
LEPYLIQRGFLQRTPRGRMATVRAWNHFGITPPEMP
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgatagaagcagatcgcctgatttcagcaggcgccacgatcgcagaagacgtcgccgat
cgcgccattcgcccgaagtttttggcggaatatgtcggccaaccgcaggtgcgctcccag
atggagatctttattcaggcggcaaaactgcgtggcgatgcactagatcacttgctgatt
ttcggcccgccagggttaggtaaaacgactctggcgaatatcgttgccaatgaaatgggc
gtcaatctccgaaccacgtccggcccggtgctggaaaaagcaggcgatctggcggctatg
ctcaccaatcttgaaccgcatgatgtgctgtttattgatgagattcaccggctttcaccg
gtggtggaagaagtactctatccggcgatggaagattaccagttggatattatgattggc
gaagggcctgctgcacgttcaattaaaatcgatctgccgccgtttacgctcattggcgcg
acgacgcgcgccgggtcgttaacgtccccgctacgcgaccgttttggtattgtgcagcgc
ctggagttctaccaggtgcccgatctgcagcacatcgtcgggcgcagcgcaaggcacatg
gggcttgagatgagcgatgacggcgcgctggaagtggcgcgtcgggcgcgcggcacgccg
cgtatagccaaccgcctgctcagacgtgtgcgtgatttcgccgaggtgaagcatgacggg
gctatttcagcggaaattgccgcgcaggcgctggatatgctgaacgtcgatgcggaaggg
tttgactatatggatcgcaagctgctgctggcggttattgataaattcttcggtggcccg
gtgggactggataacctggcggcggcgattggcgaagagcgtgaaaccattgaggatgtg
ctggagccgtatctgattcagcgaggctttttgcagcgcacgccgcgtgggcgtatggca
acggtgcgcgcctggaaccatttcgggatcacgccgccagagatgccttag
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