Salmonella enterica subsp. enterica serovar Javiana: CFSAN001992_08555
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Entry
CFSAN001992_08555 CDS
T02479
Name
(GenBank) outer membrane usher protein FimD
KO
K07354
outer membrane usher protein
Organism
senj
Salmonella enterica subsp. enterica serovar Javiana
Brite
KEGG Orthology (KO) [BR:
senj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
senj02035
]
CFSAN001992_08555
Bacterial motility proteins [BR:
senj02035
]
Pilus system
Fimbrial proteins
CFSAN001992_08555
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Usher
PapC_N
PapC_C
Motif
Other DBs
NCBI-ProteinID:
AGF82021
LinkDB
All DBs
Position
complement(1686210..1688822)
Genome browser
AA seq
870 aa
AA seq
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MKKTTWFAGRFPGYVSPLNGVALSVLAALCPLTSRGESYFNPAFLSADTASVADLSRFEK
GNHQPPGIYRVDIWRNDEFVATQDIRFEAGAVGAGDKSGGLMPCFTPEWIKRLGVNTAAF
PVSDKGVDTTCIHLPEKIPGAEVAFDFASMRLNISLPQASLLNSARGYIPPEEWDEGIPA
ALINYSFTGSRGTDSDSYFLSLLSGLNYGPWRLRNNGAWNYSKGDGYHSQRWNNIGTWVQ
RAIIPLKSELVMGDSNTGNDVFDSVGFRGARLYSSDNMYPDSLQGYAPTVRGIARTAAKL
TIRQNGYVIYQSYVSPGAFAITDLNPTSSSGDLEVTVDEKDGSQQRYTVPYSTVPLLQRE
GRVKYDLVAGDFRSGNSQQSSPFFFQGTVIAGLPAGLTAYGGTQLADRYRAVVVGAGRNL
GDWGAVSVDVTHARSQLADDSTHQGQSLRFLYAKSLNNYGTNFQLLGYRYSTRGFYTLDD
VAYRSMEGYDYEYDSDGRRHKVPVAQSYHNLRYSKKGRFQVNISQNLGDYGSLYLSGSQQ
NYWNTADTNTWYQLGYASGWQGISYSLSWSWSESVGISGADRILAFNMSVPFSVLTGRRY
ARDTILDRTYATFNANRNRDGDNSWQTGVGGTLLEGRNLSYSVTQGRSSSNGYSGSASAS
WQATYGTLGVGYNYDRDQHDYNWQLSGGVVGHADGITFSQPLGDTNVLIKAPGAKGVRIE
NQTGVKTDWRGYAVMPYATVYRYNRVALDTNTMDNHTDVENNVSSVVPTEGALVRAAFDT
RIGVRAIITARLGGRPLPFGAIVRETASGITSMVGDDGQIYLSGLPLKGELFIQWGEGKN
ARCIAPYALAEDSLKQAITIASATCIRPSS
NT seq
2613 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagacaacctggtttgcagggcgatttcccggctatgtatcaccgttaaacggc
gtggcgctgtcggtgctggcggcgctgtgtccgctgacgagccgcggcgaaagttatttc
aaccctgcgtttttgtcggcggataccgcgtctgtggcggatttatctcgctttgaaaaa
ggtaatcatcagcctcccggtatttaccgggtggatatctggcgtaacgacgaattcgta
gcgacgcaggatatccgttttgaggcgggcgccgtgggcgccggcgataaatccggcggc
ctgatgccttgttttacaccggagtggattaaacggctgggcgtgaataccgcggcgttc
cctgtctcagataaaggcgtcgataccacgtgtattcaccttcctgagaaaatcccgggc
gcggaggtcgcgttcgatttcgcgtcgatgcgcttaaatattagcttgccgcaggcgtca
ttgctcaacagcgcgcgtggctatatcccgccggaggagtgggatgaagggatacccgcc
gcactcattaattacagttttaccggtagccgcggaacagacagcgatagctattttttg
agtctgttgagtggtttgaactatggcccctggcggctgcgtaataacggagcctggaac
tattcgaagggggacggctatcattcgcaacgctggaacaacattggcacctgggtacag
cgcgccatcattccgctaaaaagcgaactggtcatgggggacagcaataccgggaacgat
gttttcgatagcgtcggctttcgcggagcgcggctgtactcttctgacaatatgtatccc
gatagcctgcaaggctacgcccccacggtcagagggatcgcccggacggcggcaaagctg
acgatacgacagaacgggtatgttatctaccaaagctatgtgtcgccgggcgcgtttgcg
attaccgatcttaatcctacctcttccagcggcgaccttgaggtgacggtagatgaaaaa
gacggtagccaacaacgttacacggtgccttactctaccgttccgctattgcagcgtgag
ggcagggtgaagtatgacctggtggccggggattttcgcagcggcaatagtcagcagtct
tcgccattctttttccagggaacggtgattgccggcctgcctgcggggctgacggcttac
ggcggtacgcaacttgccgatcgttaccgtgccgtggtggtcggggcggggcgaaatttg
ggcgactggggagccgtgtcggtcgatgtcacacatgcgcgtagccaactggcagatgac
agcacccatcaggggcaatcgttgcgttttctgtacgccaaatcgctgaataattacggg
actaattttcaattgctgggttaccgctattccacgcgcggattttacaccctggatgat
gtggcatatcgcagtatggaagggtacgactacgaatacgatagcgacggacgccgccat
aaagtgccggtggcgcagagctaccacaatctccgttacagcaaaaaaggccgctttcag
gtcaatatttcgcaaaacctgggggattacgggtcactgtatctttccggcagtcaacaa
aattactggaatacggcggataccaatacctggtatcaactgggatacgccagtggatgg
caaggcataagttattcgctgtcatggtcgtggagcgagtcggtggggatctcaggcgcc
gaccgcattctggcattcaatatgtccgttccgtttagcgttctgaccggacggcgctat
gcgcgcgacactattcttgatcgtacttatgccacgtttaacgccaaccgcaaccgtgac
ggcgacaatagctggcagaccggtgtgggcggcacgcttctggaaggtcgtaatctgagc
tacagcgtgacgcagggacgtagcagtagcaatggttatagcggcagcgccagcgctagc
tggcaggcgacgtatggcacgctgggcgtgggatataactacgatcgcgatcagcatgac
tataactggcaactttccggcggcgtggtcggtcatgcggatggtattacgtttagccaa
ccgttgggcgataccaatgtcttgattaaagcgccgggagcgaaaggcgtgcgcatcgaa
aaccagaccggcgtgaaaacggactggcggggctatgcggtaatgccctacgccacggta
tatcgctataaccgcgtcgcgttagataccaacacgatggacaaccataccgatgtcgaa
aataacgtcagcagcgtagtgccgacagagggcgcgctggtgcgggccgcttttgatacg
cggataggcgtaagggcaatcattaccgcgaggcttggcggacgtccgttaccgtttggc
gcgatagtacgagaaaccgccagcggcattaccagcatggtcggcgatgacggacaaatt
tatctgagcggcttgccgctaaaaggtgaactgttcatccagtggggagaggggaaaaac
gcacgttgtatcgccccttacgccctagcggaggatagcctgaagcaggcgattacgata
gccagcgcgacttgtatccgtccgtcgtcataa
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