Salmonella enterica subsp. enterica serovar Javiana: CFSAN001992_11695
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Entry
CFSAN001992_11695 CDS
T02479
Symbol
treR
Name
(GenBank) trehalose repressor
KO
K03485
LacI family transcriptional regulator, trehalose operon repressor
Organism
senj
Salmonella enterica subsp. enterica serovar Javiana
Brite
KEGG Orthology (KO) [BR:
senj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
senj03000
]
CFSAN001992_11695 (treR)
Transcription factors [BR:
senj03000
]
Prokaryotic type
Helix-turn-helix
LacI family
CFSAN001992_11695 (treR)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LacI
Peripla_BP_3
Peripla_BP_1
HTH_3
HTH_IclR
HTH_23
HTH_7
HTH_31
MarR_2
HTH_Tnp_ISL3
MarR
HTH_Crp_2
CENP-B_N
TrmB
HHH
HTH_26
AAA_18
HTH_28
Motif
Other DBs
NCBI-ProteinID:
AGF82641
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All DBs
Position
2363576..2364523
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AA seq
315 aa
AA seq
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MQNRLTIKDIARLSGVGKSTVSRVLNNESGVSERTRERVEAVMNQHGFFPSRSARAMRGQ
SDKVVAIIVTRLDSLSENLAVQTMLPAFYEQGYDPIMMESQFSPTLVMEHLGMLRRRNID
GVVLFGFTGITEELIAPWKTSLVLLARDAQGFASVCYDDEGAIHILMQRLYEQGHRNISF
LGVPHSDITTGKRRHDAYLAFCKKHKLHPVAALPGLAMKQGYEHTASVIMPDTTALVCAT
DTLALGASKYLQEQRIETLQLASVGNTPLIKFLHPEIVTVDPGYAEAGRQAASQLIEQIN
GRCDPRRIVIPSTLA
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaccggctcactatcaaagacatcgcccgcctgagcggcgtagggaaatcaacc
gtttcccgcgtgcttaacaatgaaagcggcgtaagcgaacgtacccgcgagcgtgtcgaa
gcggtgatgaatcaacacggtttctttccgtcccgctccgcccgtgcgatgcggggacaa
agcgataaagtggtcgctattatcgtcactcgccttgattcgttgtctgaaaacctcgcg
gttcaaaccatgctgcctgcgttttatgaacagggctacgaccctattatgatggaaagt
cagttctcgccgacgctggtaatggaacatctgggcatgctcagacgacgtaacattgat
ggcgtggtgctgtttggctttaccggcatcacagaagagttgatcgccccctggaaaacc
tcgctggtgctgctggcaagagatgcgcaaggttttgcctccgtctgttacgacgacgag
ggcgcgattcatatccttatgcagcggctgtatgagcagggacaccgcaacattagcttt
ctgggcgttccccatagcgatattaccaccggcaaacgtcggcatgacgcatacctggcg
ttttgcaaaaaacataaacttcatcccgtcgccgccctgcccggtcttgccatgaagcag
ggctatgagcatacggcaagcgtcatcatgccggataccaccgcgttagtctgcgccacc
gatacgctggcgttgggcgccagtaagtatttacaggagcaacgtattgagacgctgcaa
ctggcaagcgtcgggaacacgccgctgataaaattcctgcacccggagatcgtcactgtc
gatcctggctatgctgaagccggacgacaggcggcttcgcagctgatcgaacagatcaat
ggccgctgcgatccgcgccggatcgtcattccttctaccctcgcctga
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