Salmonella enterica subsp. enterica serovar Javiana: CFSAN001992_12110
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Entry
CFSAN001992_12110 CDS
T02479
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
senj
Salmonella enterica subsp. enterica serovar Javiana
Pathway
senj03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
senj00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
CFSAN001992_12110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
senj03019
]
CFSAN001992_12110
03009 Ribosome biogenesis [BR:
senj03009
]
CFSAN001992_12110
Messenger RNA biogenesis [BR:
senj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CFSAN001992_12110
Ribosome biogenesis [BR:
senj03009
]
Eukaryotic type
Pre-60S particles
RNases
CFSAN001992_12110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RE_XamI
Motif
Other DBs
NCBI-ProteinID:
AGF82724
LinkDB
All DBs
Position
complement(2444150..2444695)
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AA seq
181 aa
AA seq
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MSADENNLIWIDLEMTGLDPERDRIIEIATLVTDASLNILAEGPTIAVHQSDAQLALMDD
WNVRTHTGSGLVDRVKASTMGERDAELATIEFLKTWVPAGKSPICGNSIGQDRRFLFKYM
PELEAYFHYRYLDVSTLKELARRWKPEILAGFTKQGTHQAMDDIRESVAELAYYREHFIK
L
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgagtgccgatgaaaacaacctgatttggatcgatctggagatgacaggtctggacccc
gagcgcgatcgcattattgagatagccacgctggtgacggatgccagtctgaatattctg
gcggaagggccgacgattgcggtacatcaatccgatgcgcaactggcgttaatggatgac
tggaacgtgcgcacccataccggcagcggcctggtagatcgcgttaaggcaagtacgatg
ggcgaacgagacgctgaactggcgacgattgaatttctgaaaacgtgggtgcctgcgggt
aagtcgccgatttgcggtaacagtatcggtcaggatcgtcgttttctgtttaaatatatg
ccggaactggaggcttacttccactatcgctatctggatgtcagtacgctcaaggaactg
gcgcgccgctggaagccggagattctggccggctttaccaagcagggcacgcaccaggcg
atggatgatattcgcgagtcggtggcggagctggcttactaccgcgagcatttcattaag
ctgtga
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