Salmonella enterica subsp. enterica serovar Javiana: CFSAN001992_12570
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Entry
CFSAN001992_12570 CDS
T02479
Name
(GenBank) Lipid A export ATP-binding/permease protein msbA
KO
K12541
ATP-binding cassette, subfamily C, bacterial LapB
Organism
senj
Salmonella enterica subsp. enterica serovar Javiana
Pathway
senj02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
senj00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
CFSAN001992_12570
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
senj02000
]
CFSAN001992_12570
02044 Secretion system [BR:
senj02044
]
CFSAN001992_12570
Transporters [BR:
senj02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
CFSAN001992_12570
Secretion system [BR:
senj02044
]
Type I secretion system
Adhesin protein transporter
CFSAN001992_12570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
AAA_21
SMC_N
DUF2813
QCR10
AAA_29
Phage_holin_6_1
Motif
Other DBs
NCBI-ProteinID:
AGF82814
LinkDB
All DBs
Position
complement(2540214..2542280)
Genome browser
AA seq
688 aa
AA seq
DB search
MDKKLEPYYLSAETALSIVSKKFNIKIDIKEDDINLRFKKYDRNNTDDSIQMKNFFLSLG
LSLQDILFNNGEDLLNEPMPILLLTPEMKWMVCVSGGQKIKLVNARGELCYVEIEDEYLK
ELSAFSILPLNKVVDSIRVKNIIKNSLSMNKIFYTKYFFSSLFMAIFALTIPVFSNLFYD
KLVPSASVSSLFGVAIIVAVFIVFEFILRTSKDIYQSITARQDDVDIDIAFLEAVLYSKK
KNGRSMSSAFVLWNEFQKIKPVLLNSIFQRIADIPIFIIFLIVIYVNLGLVVIVPVTMFI
VSIIISLVNHHYTNELMNKQKEGQKNRNIFISEVFLSIKMIHTLNNQGLLFDWVNTSNEQ
SYLNLKIRKLNLIYQSILGSMSSITQITIMVIAFFMVIKGDVTTGAIVSSVIVSGRISGI
ISNFSSTLISILSAEKTGKDLLSFFDEDQAEKTPALQSISKCNGDISIRGVSYQYDAQSP
MIINRLSIDIPAGQRVAVIGECGAGKSSLLGMLSGYLSPTDGAILYDGYNLGHLSQNFFS
QHLSVVTTHDVLFTGTIESNFALKPQNDRGRVLKALHLANCGFILQHPMGLKFPVNFMAK
NLSSGQQQQLLLARSLSSNASVFLWDEPTSNLDENTEKQIFDNLDEFIHGKTLIMVTHRR
YLIKYFDRVLVMKGGKIIRDCSPDKLLT
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atggataaaaaactagaaccttattatttaagtgcggaaacggcattatctatagtgtct
aaaaaattcaacataaaaattgacatcaaagaagatgatataaatttaagatttaaaaag
tacgacagaaataacactgacgactctatacaaatgaagaatttctttttgtcgttaggg
ctttctctacaggatatattatttaataatggtgaggatttactaaatgagcctatgccg
attttactattaacaccagaaatgaagtggatggtgtgtgtgagtggcgggcaaaaaata
aagttggtaaacgcgcgcggtgaactctgttatgttgaaattgaagatgaatatttaaaa
gagttatctgcatttagtatactacctttaaataaagttgttgatagtataagagtaaaa
aatatcataaaaaactctttatcgatgaacaagattttttatactaaatacttcttttca
tctctttttatggcaatttttgcgttaactattccagtatttagtaatctgttctatgat
aagcttgttccaagtgcttcggtttcatctttatttggcgtggctataattgttgctgta
tttattgtttttgagtttatccttcgtacttcgaaagatatttatcagtctatcacagca
aggcaggatgacgtcgatattgatatcgcatttcttgaagcggtactttatagtaaaaag
aaaaatggcagatccatgtcatcagcatttgtgctatggaatgagtttcagaaaattaaa
cccgttttattaaactcgatctttcaacgtatagccgatattccaatatttattatattt
ctcattgttatatatgtaaatttaggtctggtcgttattgtccctgttaccatgtttatc
gtctctattattatttccctcgttaaccaccattatactaatgagttaatgaacaaacaa
aaagaaggacagaagaacaggaatatcttcatctcagaggttttcttatctattaaaatg
atccataccttaaataatcaaggtttactttttgattgggtcaacacatcaaatgaacag
tcgtatcttaacctgaagataaggaaattaaatcttatctatcaatctatattggggagt
atgtcatctattacccaaataactattatggtaatagccttttttatggtaatcaagggt
gatgttactactggcgcaattgtttcatctgtcattgtctctggtcgtatttccgggatc
atttcgaatttttcttctacattaatctctattttatcagcagaaaaaaccggtaaggat
ctgctttctttttttgatgaagatcaggcagaaaaaacaccggcattacagtccatatca
aagtgcaatggcgatatctctattcggggtgtgagttatcagtatgacgctcaatctccg
atgattattaaccgactgtctatagacatacctgcggggcagcgtgtcgcagtgataggc
gaatgcggtgcaggaaaaagctcattactgggaatgctatctggctacctttcgccaaca
gacggcgccatcttatatgatggatataacttagggcatttatcgcagaactttttttct
cagcatttaagcgtggtgacgacacatgatgttttattcaccggaaccattgaaagtaat
ttcgcgttaaaaccgcaaaacgacaggggccgggtactcaaggcgctccatctggcgaac
tgtggttttatcttgcaacatcctatggggctgaagtttccggtgaattttatggctaaa
aacctgtcatccggacagcaacagcagttattattagcacgtagtctgagcagtaacgcc
agcgtctttttatgggatgaaccaacatcaaatctggatgaaaataccgagaagcaaatt
tttgataacttagatgagtttattcatgggaaaacgttgatcatggtgacgcatcgtcga
tacctgataaagtattttgaccgggtcctggtaatgaaaggtggaaaaataatccgtgat
tgttctccggataaattattaacgtaa
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