Salmonella enterica subsp. enterica serovar Javiana: CFSAN001992_13950
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Entry
CFSAN001992_13950 CDS
T02479
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
senj
Salmonella enterica subsp. enterica serovar Javiana
Pathway
senj00300
Lysine biosynthesis
senj00470
D-Amino acid metabolism
senj01100
Metabolic pathways
senj01110
Biosynthesis of secondary metabolites
senj01120
Microbial metabolism in diverse environments
senj01230
Biosynthesis of amino acids
Module
senj_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
senj00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
CFSAN001992_13950 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
CFSAN001992_13950 (dapF)
Enzymes [BR:
senj01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
CFSAN001992_13950 (dapF)
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
AGF83084
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All DBs
Position
complement(2869264..2870088)
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AA seq
274 aa
AA seq
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MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLSDRHLGVGFDQLLVVEPPYDPELDFHY
RIFNADGSEVSQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLSVTEDELVRVNMGE
PNFEPAQVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDNVDTAAVETLGPVLE
SHERFPERANIGFMQVVRREHIRLRVYERGAGETRACGSGACAAVAVGIQQGLLAEEVRV
ELPGGRLDIAWKGPGHPLYMTGPAAHIYDGFIHL
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgcaattctctaaaatgcatggccttggcaacgattttatggtcgtcgacgcggtaacg
cagaatgtctttttttcgccggaactgattcgtcggctatccgacagacacctgggcgta
gggttcgatcagctgctggtggttgagccgccctatgatcctgagttggactttcattac
cgcatcttcaacgccgacggcagtgaagtctcgcagtgcggcaatggcgcgcgctgtttc
gcgcgatttgttcgcctgaaagggctaaccaataaacgcgacattcgggtcagtaccgcg
aatggccggatggtactgagcgtcacggaagatgaactggtgcgggtgaatatgggggag
ccaaactttgaacccgcgcaggtgccttttcgcgccaacaaagcggaaaagacgtatatt
atgcgagcggcggaacagaccatactgtgcggcgtggtttcaatgggcaatccgcactgt
gtcattcaggttgataacgtcgacacggcggccgttgaaacactggggccggttctggaa
agccatgagcgttttccggaacgtgccaacattggttttatgcaggttgtaagacgtgag
catatccggctgcgagtctatgaacgcggcgcaggggagacccgtgcgtgcggcagcggc
gcgtgcgctgccgttgccgtggggattcagcaggggctgctggctgaagaagtacgcgtg
gaattaccgggcggtcggctggatatcgcctggaaaggtccgggtcatccgttatacatg
actggtccggcggcacatatctacgacggatttatccatttatga
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