Salmonella enterica subsp. enterica serovar Javiana: CFSAN001992_18595
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Entry
CFSAN001992_18595 CDS
T02479
Symbol
recC
Name
(GenBank) exonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
senj
Salmonella enterica subsp. enterica serovar Javiana
Pathway
senj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
senj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CFSAN001992_18595 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
senj03400
]
CFSAN001992_18595 (recC)
Enzymes [BR:
senj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
CFSAN001992_18595 (recC)
DNA repair and recombination proteins [BR:
senj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CFSAN001992_18595 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
AGF83997
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All DBs
Position
3844892..3848263
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AA seq
1123 aa
AA seq
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MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI
AFPLPASFIWEMFVRVLPDIPKESAFSKQSMSWKLMTLLPQLLDKDEFVLLRHYLTDDTD
KRKLFQLSARAADLFDQYLVYRPDWLTQWEAGKSVEGLGEAQNWQAPLWKALVEYTAALG
QPRWHRANLYQRFIQTLESATACPPELPSRVFICGISALPPVYLRALQALGKHIEIHLLF
TNPCRYYWGDIKDPAWLAKLMARQRRHSFEDRHLPLFRENQNPEALFNSDGEQDIGNPLL
ASWGKLGRDYIYLLSELENSQELDAFVDITPDNLLHRIQADILELESHAVAGVNLEEYSR
SDNKRLLNPKDNSLSFHVCHSPQREVEILHDRLLAMLEADPTLTPRDIIVMVADIDSYSP
FIQAVFGSAPTERYLPYAISDRRARQSHPVLQAFISLLSLPDSRFVSEDVLALLDVPVLA
ARFTINEEGLRYLRLWVNESGIRWGIDDDNVRELELPATGQHTWQFGLTRMLLGYAMESA
QGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNDFFL
PDADTEAAMTLIEQQWQAIIAEGVAAEYGDAVPISLLRDELAQRLDQERISQRFLAGPIN
ICTLMPMRSIPFRVVCLLGMNDGVYPRQLAPLGFDLMSQKPMRGDRSRRDDDRYLFLEAL
ISAQQTLYISYIGRSIQDNSERFPSVLVQELVDYIGQSHYLPGDETLTCDESEARVKAHI
TRLHTRMPFDAQNYQPGEQQSYAREWLPAASQSGKAHSDFVQPLPFTMPETLTLESLQRF
WAHPVRAFFQMRLQVNFRSEESEIPDAEPFELEGLTRYQLNQQLLNTLVEEDDAERLFRR
FRAAGELPYGAFGEIFWDAQCQEMQQLASRVIACRKPSQSLEVDLLCNGVQLTGWLPQVQ
EDGLLRWRPALISVAQGVQLWLEHLVYCASGGSGESRLFLRKEGEWRFPPLDKAQAMAYL
AQLIEGYREGMSSPLLVLPESGGAWIKACYDAENDVMLDDDDTLQKARTKFLLAYEGNMM
VSGEGEDIWYQRLWRQLESETLQAIIAQSRHYLLPLFRFNQSR
NT seq
3372 nt
NT seq
+upstream
nt +downstream
nt
atgttaagggtctaccactccaatcgtctggatgtgctggaagcgttgatggagttcatc
gtcgaacgcgagcggctggatgatccctttgaaccagaaatgattctggtacaaagcacg
ggtatggcgcagtggctgcagatgaccctttcacaaaagtttggtattgcggcgaatatc
gcttttccgttaccggcgagttttatctgggagatgtttgtccgcgtgttgccggatatc
cccaaagaaagcgctttcagcaaacaaagcatgagctggaaactgatgaccttgctgccg
cagttgctggataaggatgagtttgtactgctgcgccattatctgaccgacgacaccgat
aaacgcaaactctttcagctttccgcgcgcgctgccgacctgttcgatcagtatctggtt
tatcggcctgactggcttacgcagtgggaagcaggaaaaagcgtggaaggtctgggggag
gcgcaaaactggcaggcgccgctgtggaaagcattggtggaatataccgccgcgctgggg
cagccacgctggcatcgcgccaatctctaccaacgctttattcaaacgctggaaagcgcg
accgcctgcccgccagagttgccgtcccgcgtttttatttgcggcatttccgcgttaccg
ccagtgtatctcagagcgttgcaggcgctgggcaaacatattgaaatccatctccttttt
actaatccgtgtcggtattactggggggacattaaagacccagcctggctggcaaaactc
atggcccgccagcgtcgtcacagttttgaagaccgtcatttaccgttgttccgtgaaaac
cagaatccggaagccttatttaacagcgacggtgaacaggatatcggtaatccgctactg
gcctcatggggaaaactggggcgggattatatctacctgctatctgaactggaaaacagc
caggagctggatgcgtttgttgatattacgccagataatcttttgcatcggattcaggca
gatattcttgaactggaaagccatgcggtggcgggcgtaaatcttgaggagtattcgcgc
agcgacaataagcgtctgctcaatcccaaggataacagtctctcttttcacgtttgtcac
agcccgcagcgcgaggtggaaatactgcacgatcgcctgctggcgatgctggaagccgat
ccgacgctaacgccgcgcgacattatcgttatggtagctgatattgacagctatagcccg
tttatccaggcggtatttggtagcgcgccaacggagcgctatctgccttatgccatttcc
gatcggcgggcgcgtcagtcacatccggtgttacaggcatttatcagcctactttcgtta
ccggacagccgcttcgtctccgaggatgttctggcgttgttagacgtaccggtattggct
gcccgctttacgatcaacgaagaagggctgcgttatttgcgcttgtgggtcaatgagtca
ggcattcgctggggaattgacgatgacaacgtgcgcgagctggaacttcctgccacgggg
cagcatacatggcaatttggcctgacgcgtatgctgctggggtatgccatggaaagcgcc
cagggcgagtggcagtcggttctgccttatgacgaatccagcggtctgattgctgagctg
gtcgggcatctggcttcgctgctgatgcagcttaatatctggcggcgcggtctggcgcag
gagcgaccgctggaagagtggttgcccgtttgtcgcgacatgctcaatgatttcttcctg
cccgatgcggacacggaagcggcaatgacattgattgaacagcagtggcaggccattatc
gccgaaggcgtcgcggcggaatatggcgacgcggtaccgatttcgctactgcgggatgaa
ctggcgcagcgtctggatcaggagcgtattagccagcgcttcctggcgggccccatcaat
atttgtacgctgatgccgatgcgttccattccgttcagagtcgtttgcctgctgggaatg
aacgacggcgtatacccgcgccagcttgcgccgttgggttttgacctgatgagccaaaaa
cccatgcgcggggatcgtagccgtcgcgacgatgaccgctacttgtttctggaagcgtta
atctcggcgcagcagacgctgtatatcagctacatcggtcgctccatccaggataatagc
gaacgctttccctctgtactggtgcaagaattggtggattacatcgggcaaagccactat
ttgccgggcgacgaaacgctgacctgtgatgagagcgaagcacgagtcaaagcgcatatt
acgcgtctgcatacccgtatgccttttgatgcgcaaaattaccaacccggcgaacagcaa
agttatgccagagagtggttgcccgcggcgagtcaatcgggaaaagcgcattctgacttt
gtgcagccgcttccttttacgatgccggaaacattgactctggaaagtctgcagcgtttt
tgggcccatccggtacgcgcattttttcagatgcggcttcaggttaatttccgctcggaa
gagagtgagattcctgatgcggaaccgtttgaattagagggattgacgcgatatcaactt
aaccaacagttgctcaatacgctggttgaagaggacgacgccgaacgcttgttccgccgt
ttccgggctgcgggagagttgccttacggcgcgtttggcgaaatattctgggatgcgcaa
tgccaggagatgcagcaactggcaagccgggtcatcgcctgtcgtaagccgagccaaagc
ctggaagtggatctgctttgcaatggcgttcagctaaccggctggctaccgcaggtacag
gaggatggattattgcgctggcgtcccgctttaatcagcgttgcgcaaggtgtgcaactt
tggctggaacaccttgtctattgtgccagcggcgggagtggcgaaagtcgtctgtttttg
cgcaaagagggagaatggcgatttccgccacttgataaagcgcaggcaatggcttacctg
gcgcaactgattgaaggctaccgggaaggcatgtcttctccgctattggtactgccggaa
agcggcggcgcatggataaaagcctgttatgacgctgaaaatgatgtcatgttagacgat
gatgataccttacagaaggccaggacaaagtttttactggcttatgaaggcaacatgatg
gtgagcggcgaaggcgaagatatctggtatcaacgtctttggcgtcagctggaatctgaa
acgttgcaggctatcattgcgcagtcccgacattacctgttaccgctgtttcgttttaat
cagtctcgttga
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