Salmonella enterica subsp. enterica serovar Javiana: CFSAN001992_20985
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Entry
CFSAN001992_20985 CDS
T02479
Name
(GenBank) AIDA autotransporter-like protein ShdA
Organism
senj
Salmonella enterica subsp. enterica serovar Javiana
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Paralog
Gene cluster
GFIT
Motif
Pfam:
PATR
Autotransporter
AC_1
Motif
Other DBs
NCBI-ProteinID:
AGF84469
LinkDB
All DBs
Position
4344895..4350750
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AA seq
1951 aa
AA seq
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MYVVASELARGHSKVKIQAHSNEVSPSIEKPESGWAISAKHNALAFAIVAALGFASPLAM
ADNPVSYIDGTDHDLNAETSPISYSGTGQGTALYLEGLATAKGGWQPTSGTGTGVVIETD
GGGAPLSGGSDAVATAVSLYRGAKLELTEAKIYTKGNYTAGINLDEQSNLTLNGGSVQVE
GNYGILMLYNNSQATLMGTEVTATAETTSGIVSQQGSTLNITDGSEITLTRGQLRVVGST
TGNAFLNVSDSTVSSTGTDSTVIASNKGVLDITNSTVMHDNAKGAAIEAGNASTVTISGD
NKNSMVITSEDIGIKSAKSSVNIDGATIIAKGDGILMTTGGSSFYSNNSGLTVNNADVTS
DDAAALHVDKNTVIEKPITLTDSTLTGSTAIKLDNAATVEANNTTLNGNIDAGSTVSSLS
LAEKSSLQGSVNGLNSSLTLDETSQWNMTDPSTVGNLTNDGGITLGNASGSTGTLLTVDN
TLTLQDGSQINATLDTANSSPIIKAANVTLDGTLNLSSTATFVAPETDEHLGAFTLIDSQ
TAITTDFDSVTLDADISAMPDYLTINAGVDANDNTNYELSTGLSWYAGANSTRAAHGAFT
VDAGSTFTVTSELDETTATSNWDGSKLTKQGDGTLILSNTGNDYGDTEIDGGILTAKDAA
SLGTGDVTIAESATLALSQGTLDNNVTGGGQIVKTGNDELIVTGDNTYSGGTTITGGTLT
ADYADSLGTGVIANSGVLQVGEGELENTLSGSGSLVKTGTGELTLSGDNSYSGDTTITGG
TLTADHADSLGTGVIANSGVLQVGEGELENTLSGSGALVKTGTGELTLSGDNTYSGGTTI
TGGTLTADHADSLGTGVIANSGVLQVGEGELENTLSGTGSLVKTGTGELTLSGDNTYSGG
TTITGGTLTADHADSLGTGVIANSGVLQVGEGELENTLSGSGLLVKTGTGELTLSGDNTY
SGGTTIDDGVLIATNVNALGGGDVDNTGTLKLDAEGEFNLANVTTQSGATTELAKGTTLN
VDSLTQQADSTLNIDLSKANGESAITADSVTLGGTLNVTGIGSVTDSWTPEAYTYTLIDS
DSAITSDFDNLTVAGMNREDVDFLTIDGKVDEADNTHYDLTASLSWYADRDNASTDAHGT
FTLSDPDGSFNVAANLTDVDDTLDPNSTWDGKSLTKEDAGTLILSGDNDYSGGTTINEGT
LVAASTTALGTGLVDNNATLVLDADGEVSAVGGITTHSGATTQLALGTSLDLGDSALIQQ
DGSTLNVELNSDSVQPLITGGSATLGGDLVVSDASLQARASDAEFQSFKLMDMDSDISGD
FTSLTMNLTDQPDYLTVTGTINPEDASEYLLTEGLSWNATATSATPAHGTFTLGAGDSFE
VTSVLGDKTGNGDWDGKSLTKLGAGKLTLSGANTYSGDTNVQEGTLWLSGDGTIGEMGSQ
QAVNVASDATFGGSNGTTVNGKVTNEGTLVFGDSEETGAILTLNGDLINMGTLASGSSSS
TPGNTLYVDGDYTGNGGSLYLNTVLGDDDSATDKLVISGDASGTTDLYINGIGNGAQTTN
GIEVVDVGGTSTSDAFVLKNEVNASLYTYRLYWNESDNDWYLASKAQSDDDDSGSDVTPP
DDDSDVTPPDDGGDVAPQYRADIGAYMGNQWMARNLQMQTLYDREGSQYRNADGSVWARF
KAGKAESEAVSGNIDMDSNYSQFQLGGDILAWGNGQQSVTVGVMASYINADTDSTGNRGA
DGSQFTSSSNVDGYNLGVYATWFADAQTHSGAYVDSWYQYGFYNNSVESGDAGSESYDST
ANAVSLETGYRYDIALSNGNTVSLTPQAQVVWQNYSADSVKDNYGTRIDGQDSDSWTTRL
GLRVDGKLYKGSRTVIQPFAEANWLHTSDDVSVSFDDATVKQDLPANRAELKVGLQADID
KQWSVRAQVAGQTGSNDFGDLNGSLNLRYNW
NT seq
5856 nt
NT seq
+upstream
nt +downstream
nt
atgtatgtcgtggcttcagaactggcgcgaggccacagcaaagttaaaatacaggcacac
tctaatgaagtctccccttctattgaaaagcctgagtcaggatgggcaattagtgcaaaa
cacaatgcgctggccttcgcaattgttgccgcgcttgggttcgccagtccgctggctatg
gccgataatccggtgtcctacattgacggaaccgaccacgacctgaacgcagaaacgtcg
ccaatttcttattcaggtaccggccagggtacggcactgtatctggaaggtttggcaacg
gctaaggggggatggcagccaacctcaggcacaggcacaggcgttgtgattgagacggac
ggcggcggggctcccctttcgggtggcagtgatgcggtggctacagcggtttcgctctat
cgtggagcaaaacttgagcttaccgaggcaaaaatttatacgaaggggaactataccgcc
ggtatcaacctcgacgagcaaagcaacctgacgttgaatggaggaagcgtccaggttgaa
ggtaattatggcattttgatgctctataataattcacaagccaccctgatgggcaccgag
gtcaccgcaacggcggaaacaactagcggcatagtgtcacagcaaggcagcacgctgaac
atcacggacgggagtgaaatcacgctcacgaggggacaactgcgcgtggttggcagcaca
acaggcaacgctttcctgaatgtgagcgatagtacagtgagttccacgggtacagatagt
actgttatcgcgtccaacaagggcgttcttgatattacgaactctaccgtcatgcacgat
aatgccaaaggcgcagccattgaggctggtaatgcctcaacggtaaccatttccggcgat
aataaaaactcgatggtcattacgtccgaagatatcggcattaaaagcgctaaatcttcc
gtcaacattgacggcgccaccatcatcgccaaaggcgatggcattttgatgaccacgggg
ggcagcagtttttacagcaataactccgggctgacggtcaacaatgcggacgtgacctca
gacgacgccgccgcgctgcacgttgataaaaacacggtgatagaaaagcccattacatta
accgacagcacattgactggctcaacggctattaaactggataatgcggcaaccgtagag
gccaacaacacaacgctgaatggcaacattgacgcggggagcacagtatcgtccttgtcg
ctggccgaaaaatcctcactgcaagggagcgtcaacggcctgaacagttcattgacgctt
gacgaaaccagccagtggaacatgaccgacccgtcaaccgtcggcaacctgaccaacgac
ggcggcattacgctgggcaacgcgagcggttcgacaggtacgctgctgacggtggacaat
accctgaccttgcaggacggcagccagataaacgcgacgctggataccgccaacagctcg
ccaattatcaaagccgccaacgtcacgttggacgggacgctgaaccttagctcaacggcc
acctttgtcgcgcccgaaaccgacgaacacttaggagcgttcacgctgattgattcgcaa
actgcgatcactaccgattttgacagcgtaacgctggatgccgatatctctgctatgccg
gattaccttacgatcaacgcgggcgttgatgcgaatgataataccaactacgagttgtct
acgggcttgagttggtacgcgggcgcaaattctacgcgcgctgcgcatggcgcttttacc
gttgatgcaggcagtacctttaccgtcaccagcgaactggatgaaaccacggcgacctcc
aactgggatggcagcaagctaaccaaacagggcgacggcacgctgatcctcagcaacact
ggcaacgactacggcgacactgaaattgacggcggcattctgaccgccaaagacgccgcc
tcgctcggcactggcgatgtgacgattgcagaaagcgcaacgcttgcgctgagccagggc
acgctggataacaacgtgaccggcgggggccaaattgtcaaaaccggtaacgatgagctg
atcgtgaccggcgataacacttacagcggcggcaccaccataaccggcggtacgctgacg
gctgactatgcggattcactgggcactggcgttattgccaacagcggcgtgcttcaggtc
ggcgaaggcgagctggaaaatacgctttctggcagcggctcgctggtgaaaaccggtacg
ggcgagctgacgttaagcggcgataacagttactccggcgacaccactattaccggcggt
acgctgacggctgaccatgcggattcgctgggcactggcgttattgccaacagcggcgtg
cttcaggtcggcgaaggcgagctggaaaatacgctttccggcagcggcgcgctggtgaaa
accggtacgggcgagctgacgttaagcggcgacaacacttacagtggcggtaccaccatt
accggcggtacgctgacggctgaccatgcggattcgctgggcactggcgttattgccaac
agcggcgtacttcaggtcggcgagggtgaactggaaaatacgctttccggcaccggttcg
ctggtgaaaaccggtacgggcgagctgacgttaagcggcgacaacacttactccggcggt
accaccattaccggcggtacgctgacggctgaccatgcggattcgctgggcactggcgtt
attgccaacagcggcgtacttcaggtgggcgaaggcgagctggaaaacaccctctccggc
agcggtttgctggtgaaaaccggtacgggcgagctgacgttaagcggcgacaacacttac
tccggcggcaccactattgacgacggtgtgctgattgccaccaacgttaacgcgctgggc
ggcggtgatgtcgataacacgggtacgctgaagctggacgcggagggcgaattcaacctt
gcgaatgtcacaacccagtctggagcaacgactgagctggccaaaggtacgacgctcaac
gtcgactcgctgactcagcaagccgatagtacgctgaatattgacctcagtaaggccaac
ggtgaaagcgccattaccgccgacagcgtcacgctgggcggcacgctgaacgtcaccggc
atcggcagcgttacagacagctggacgcctgaggcatacacctacacgctgattgacagt
gacagcgccattaccagcgatttcgacaatctgaccgtcgcgggaatgaatagagaagat
gttgacttcctgactatcgacggaaaagtcgacgaagcagacaacacccactatgatctg
acggcctccctctcctggtatgcggacagagacaacgcttctaccgacgctcacggtacc
tttacccttagcgaccctgacggcagctttaacgttgcggctaatctgacagacgttgac
gacacgcttgatccgaatagcacatgggacggtaaatcgctgaccaaagaagacgcaggc
acgctgatcctctccggcgacaacgactacagcggcggcaccaccatcaatgaaggtacg
ctggtcgccgccagtacgacggcgctgggcaccggcctggtcgacaataacgccacgctg
gtgctggacgcagatggtgaagtcagcgcggtgggcggcatcaccactcatagcggcgcg
acgacccaactggcgctcggcacctcgttggatctcggcgacagcgcgttaattcagcaa
gatggcagtacgctgaacgttgagctgaatagtgactcagtgcaaccgctgattaccggc
ggcagcgccacgcttggcggcgatctggtcgtcagcgacgccagcctgcaagcgcgcgcc
tccgacgcggagttccagtcctttaaactgatggatatggacagcgatatcagcggcgac
tttaccagcctgacgatgaaccttactgaccagccggactatctgaccgtaaccgggaca
atcaatcctgaagatgcgtcagaatatctgcttaccgaagggctgagctggaatgcgacc
gccacgtcagcgacgccagcacacggcacgtttaccctgggtgcaggcgacagttttgaa
gtcaccagcgtactgggcgataaaaccggcaacggcgactgggacggtaaatcgctgacc
aaactgggcgcgggtaaactgacgctgagcggcgcgaatacctatagcggcgataccaac
gtacaggaaggcacactgtggctgtccggggacggtacgattggcgaaatgggcagccag
caggcggtgaacgtcgcctctgacgcgaccttcggcggcagcaacggtacgaccgttaac
ggtaaggtgaccaacgaagggacgctggtcttcggcgacagcgaggaaactggcgccatc
ctcaccctcaatggcgatctgatcaacatggggacgctcgccagcggcagctcctccagc
acgcctggcaatacgctttatgtcgatggcgattacaccggcaacggcggctcgctttac
ctgaataccgtcctgggcgacgatgattcggcgaccgataagttagtcatttccggcgat
gcctccggcaccaccgatctgtacatcaacggcatcggcaatggggcgcagaccactaac
ggtatcgaagtggtggatgttggcggcacatcgacaagcgatgcgtttgtgttaaaaaat
gaagttaacgccagtctgtatacctaccgtctgtactggaatgaaagtgacaacgactgg
tatctggcgtcaaaagcacagtctgatgatgacgacagcggcagtgatgtcacgcctcca
gatgatgacagtgatgtcacgcctccggacgatggcggcgatgtcgcaccgcagtaccgt
gcggatatcggcgcgtacatgggcaaccagtggatggcgcgcaacctgcaaatgcagacc
ctctatgaccgcgagggtagccagtatcgtaacgccgatggtagcgtatgggcgcgcttc
aaagcgggtaaagcggaatccgaggctgtcagcggcaatatcgatatggacagcaactac
tcccagttccagttaggcggcgacattctggcctggggcaacggccagcagagcgttacc
gttggcgtcatggcgagctacatcaacgccgataccgacagcaccggtaaccgtggcgca
gacggtagccagttcaccagcagcagcaacgtagacggctacaaccttggcgtctatgcc
acctggtttgccgatgcccaaacgcatagcggcgcgtatgtcgacagctggtaccaatat
ggtttctacaacaacagcgtagagagcggtgatgcgggttctgaatcttacgattcaacc
gctaacgctgtctcgctggaaaccggttatcgctacgatattgcgctgagtaacggcaat
accgtcagtctgacgccgcaggcgcaggttgtctggcagaattactcagcggatagcgtg
aaggataactacggcacccggatcgacggtcaggatagtgacagttggacaacgcgcctg
ggtctgcgagttgacggcaagctgtacaagggcagtcgtacggttatccagccgtttgct
gaagctaactggctgcacaccagcgatgatgtgtcggtatcgtttgatgatgccacggta
aaacaggatcttccggctaaccgtgcggagctgaaagtgggtctgcaggcagatatcgat
aagcagtggagcgttcgcgctcaggttgccgggcagactggcagcaatgattttggcgat
ctgaacggtagcctcaatctgcgctataactggtaa
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integrated database retrieval system
