Salmonella enterica subsp. enterica serovar Javiana: CFSAN001992_21775
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Entry
CFSAN001992_21775 CDS
T02479
Name
(GenBank) putative sigma L-dependent transcriptional regulator yqiR
KO
K06714
arginine utilization regulatory protein
Organism
senj
Salmonella enterica subsp. enterica serovar Javiana
Brite
KEGG Orthology (KO) [BR:
senj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
senj03000
]
CFSAN001992_21775
Transcription factors [BR:
senj03000
]
Prokaryotic type
Helix-turn-helix
Other families
CFSAN001992_21775
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
PAS_4
AAA_5
PAS
HTH_50
HTH_30
Mg_chelatase
PAS_9
AAA_7
MCM
sCache_3_2
HTH_1
RWP-RK
Motif
Other DBs
NCBI-ProteinID:
AGF84623
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Position
complement(4516008..4517435)
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AA seq
475 aa
AA seq
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MASTNQELASALRMFSRFFDLIHQPLAVINERGEYVYYNQESADLDGYSIERAMGKHMLD
VYPGMKETQSTMLSSLKKGVEYIGHYQIYYNARGQAVDYQHTTAPLYASDGGMVGVIEIG
RNMSGVRRLQEQVVELNQLLYADHHEKHHAIITENPEMLSNIAKAKRLAASNIPVTIVGE
TGTGKELFSRLIHQCSKRANKPFIALNCGALPPTLIESTLFGTVRGAYTGAENSQGYLEL
ANGGTLFLDELNAMPIEMQSKLLRFLQDKTFWRLGGQQQLHSDVRIVAAMNEAPVKLIQQ
ERLRADLFYRLSVGMLTLPPLRARPEDIPLLANYFIDKYRNDVPQDIHGLSETARADLLN
HAWPGNVRMLENAIVRSMIMQEKDGLLKHIIFEQDELNLGVPETAPENPLPSSPDPQYEG
SLEVRVANYERHLIETALDTHQGNIAAAARSLNVSRTTLQYKVQKYAIRFGVVRN
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atggcatccaccaatcaggaactggcctcggcgctcaggatgttttcccgctttttcgat
ttgattcatcagccgttggccgtcattaatgagcgtggtgaatacgtttactacaatcag
gaaagcgcggatctggacggctacagcattgaacgggcaatgggaaaacatatgctggat
gtctatccgggcatgaaagagacccaaagtacgatgctttcatcgttaaaaaaaggcgtg
gaatacattggccattatcaaatttattacaatgcgcgaggccaggccgttgactatcag
cacaccaccgcgccgctctatgcaagcgatggcggcatggtcggcgttatcgaaatcggc
aggaatatgtctggcgtcaggcggctccaggagcaggtggtagaactgaaccaactgctg
tatgccgatcaccatgagaagcaccatgccattattaccgaaaacccggaaatgctcagt
aatatcgccaaagccaaacggctggccgccagtaatattccggtgacgattgtcggggag
acgggaacgggtaaggagctattttcccgcctgatccatcaatgcagcaagcgggcgaat
aaaccatttatcgccctgaactgcggcgctctaccgcctacgcttatcgaaagtacgctt
ttcggcaccgtgcgcggcgcctataccggcgcggaaaatagccagggctatctggaactg
gcaaacgggggaacgctctttcttgatgagctgaacgccatgccgatagagatgcaaagt
aagctgctgcgattcttgcaggataaaaccttctggcggctcggcggacaacagcaactc
cactctgatgtcaggatcgttgccgccatgaacgaagcgcccgtcaaattaattcaacaa
gaacgtctgcgggcagatcttttttatcggttgagcgtcggaatgttgacgttaccgccg
ctgcgcgcccgcccggaagatattcccttactggcgaattattttattgataaataccgt
aatgacgtgccgcaggacattcacggattaagcgagacggcgcgtgctgatctgctcaat
cacgcctggccgggtaatgtcaggatgctggaaaacgcgattgtacgcagcatgatcatg
caggaaaaagacgggctgctgaaacacatcatttttgaacaggacgagttaaatttaggc
gtaccggaaaccgcgccggaaaatccccttccctcgtcacccgatccacagtatgaaggg
tcgctggaggtacgggttgccaactacgaaaggcatttaatagaaaccgcgctggatacg
catcaggggaacattgccgccgcggcccgtagccttaacgtatcccgcaccacgttacag
tacaaagtacaaaaatacgctattcgcttcggcgtggtgcgtaattga
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