Salmonella enterica subsp. enterica serovar Enteritidis OLF-SE1-1019-1: IY59_03200
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Entry
IY59_03200 CDS
T03817
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
senl
Salmonella enterica subsp. enterica serovar Enteritidis OLF-SE1-1019-1
Pathway
senl03030
DNA replication
senl03430
Mismatch repair
senl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
senl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
IY59_03200 (holA)
03430 Mismatch repair
IY59_03200 (holA)
03440 Homologous recombination
IY59_03200 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
senl03032
]
IY59_03200 (holA)
03400 DNA repair and recombination proteins [BR:
senl03400
]
IY59_03200 (holA)
Enzymes [BR:
senl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
IY59_03200 (holA)
DNA replication proteins [BR:
senl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
IY59_03200 (holA)
DNA repair and recombination proteins [BR:
senl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
IY59_03200 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delt_C
DNA_pol3_delta
DNA_pol3_delta_C
Motif
Other DBs
NCBI-ProteinID:
AIN04369
UniProt:
A0A1R2YCS6
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All DBs
Position
complement(679391..680422)
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AA seq
343 aa
AA seq
DB search
MIRLYPEQLRAQLNEGLRAAYLLLGNDPLLLQESQDAIRLAAASQGFEEHHAFTLDPSTD
WGSLFSLCQAMSLFASRQTLVLQLPENGPNAAMNEQLATLSELLHDDLLLIVRGNKLTKA
QENAAWYTALADRSVQVSCQTPEQAQLPRWVAARAKAQNLQLDDAANQLLCYCYEGNLLA
LAQALERLSLLWPDGKLTLPRVEQAVNDATHFTPFHWVDALLMGKSKRALHILQQLRLEG
SEPVILLRTLQRELLLLVNLKRQSAHTPLRALFDKHRVWQNRRPMIGDALLRLHPAQLRQ
AVQLLTRTEITLKQDYGQSVWADLEGLSLLLCHKALADVFIDG
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgatcaggttgtatcctgaacaactccgcgcgcagctcaacgaagggctgcgcgcggca
tatctgctattgggcaacgatccgctgctgctgcaggaaagtcaggacgctattcgtctg
gcggctgcgtcgcaaggcttcgaagagcaccacgcttttactctcgatcccagtaccgac
tggggatcgcttttctcactctgccaggcgatgagcctgttcgccagccgtcaaacgctg
gtgctgcaactgccggaaaacgggcctaacgcggcaatgaatgagcaactcgccaccctg
agcgagctgctgcatgacgacctgttattaatagtacgcggaaacaagctcaccaaagcg
caggaaaacgccgcctggtataccgcgctggcagaccgtagcgttcaggtcagttgtcag
acgccggagcaggcgcagcttccccgctgggtggccgccagagcgaaagcacagaatttg
caactggatgacgccgcgaaccaactgctgtgctattgctatgagggcaatctgttggcg
ctggcgcaggcgctggaacggctgtcgctgctttggcctgacggtaagttaacgcttcct
cgcgtggagcaggccgtcaatgacgccacccactttacccctttccactgggtggatgcg
ttactgatggggaaaagcaaacgcgcgctgcatatcctgcaacagctacgccttgaaggc
agcgaaccggttattctgctgcgcaccctccagcgagagctgctgctactggtaaatctc
aaacgtcagtccgcgcatacgccgttacgcgcgctgtttgataaacaccgggtctggcaa
aaccgtcgccccatgatcggcgacgcgttgctgcgtctccatcctgcacagcttcgccag
gccgtgcagttactgacgcgtacagaaattacgctcaaacaggattatggtcagtcggta
tgggcagaccttgaagggctgtcgctcctgctctgccataaggcgctggcagacgtattt
attgatgggtga
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