Secondary endosymbiont of Trabutina mannipara: TRABTM_A_01120
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Entry
TRABTM_A_01120 CDS
T04494
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
senm
Secondary endosymbiont of Trabutina mannipara
Pathway
senm03030
DNA replication
senm03430
Mismatch repair
senm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
senm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
TRABTM_A_01120 (dnaE)
03430 Mismatch repair
TRABTM_A_01120 (dnaE)
03440 Homologous recombination
TRABTM_A_01120 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
senm03032
]
TRABTM_A_01120 (dnaE)
03400 DNA repair and recombination proteins [BR:
senm03400
]
TRABTM_A_01120 (dnaE)
Enzymes [BR:
senm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
TRABTM_A_01120 (dnaE)
DNA replication proteins [BR:
senm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
TRABTM_A_01120 (dnaE)
DNA repair and recombination proteins [BR:
senm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
TRABTM_A_01120 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
SBT81974
UniProt:
A0A1C3L3Y3
LinkDB
All DBs
Position
I:complement(106308..109589)
Genome browser
AA seq
1093 aa
AA seq
DB search
MIIKPRFIHLHVHSDYSMVDGIIKIGTLVNKAADLHMPAIAITDFTNLCGLIKFYDSAHK
VGIKPIIGADFFVQNKNIGDEITELTILAANNVGYRNLILLISDAYKRGYSAVGPFIDRD
WLIKYNEGLILLSGARKGDVGKHLILGNMIQVKKRLSFYERYFTNRYYLEIIRTGRIDEE
KYLHSAVSLAEHHGLPLVATNDVRFTSPNDFEAHEIRVAIHNGVNLDDVKRQRNYSTQQY
MRSEKEMCELFSDLPEALANSVEIARRCNVTLRLGEYFLPKFPTGKMSTEKYLVKCAQEG
LEERLVFLFPNDKKRSEKRKEYDKRLNIELKVINKMGFPGYFLIVMEFIQWSKNNNVPVG
PGRGSGAGSLVAYALKITDLDPIALDLLFERFLNPERVSMPDLDVDFCMDKRDIVIEHVA
KTYGRNAVSQIITFGTMTAKAVIRDVGRVLGHPYGFIDRISKLVPNDIGITIERALVTEP
QLQAIYNADKNVKDLIDKARKLEGVTRNAGKHAGGVVIAPTKITDFAPLYCDTEGNHPVT
QFDKNDVEYAGLVKFDFLGLRTLTIINWALGMINNRLERQGLEQIDIAHIPLEDKKSFDM
LQRSETTAVFQLESRGMKDLIKRLQPDSFEDMIALVALFRPGPLQSGMVDNFINRKHGRE
TISYPDIEWQHISLKPVLEPTYGIILYQEQVMQIAQLLAGYTLGGADILRRAMGKKKPDE
MAKQRSVFKAGAESIGVDGELSMKIFNLVEKFAGYGFNKSHSAAYALVSYQTLWLKANYP
AEFMAAVMTSDIDNTEKILVIVDECKRMGLKILPPDINKGQHYFHVNDDGDIVYGIGAIK
GIGEGHIKEIINARNKDGKFSDLFNFCSRIDTKKLNRRVLEKLIMAGAFDKLGPHRAALM
NTLSSAIKAADQYTKAENIGQIDMFGIIAEVPSTVESSSNKLAPWPQNVVLEGERETLGL
YLTDHPITQYLHEIEQYTGGVRLKDIKHTECGKIVTAAGLVLSTRIMVTKRGNQIGICTL
DDRSSRLDVILFTDILEKYQHLLEKDSILIVQGQVSFDSFNSVFKITAHKLMDINKARKR
YVRGSISLKDKAN
NT seq
3282 nt
NT seq
+upstream
nt +downstream
nt
atgatcattaaaccacgttttattcatctgcatgtacacagcgactattctatggtcgat
ggtataattaaaataggcacattggtaaacaaagctgccgatttgcacatgccagcaata
gctattactgattttactaatttatgcgggttaattaaattttatgacagcgctcacaaa
gtgggaataaagccaataattggtgcagatttttttgtgcaaaacaaaaatataggcgat
gaaataacagaattaaccattcttgcggctaataatgtaggttaccgtaatctaatttta
ctaatttcagacgcatataaacgcggatacagcgcagttggaccatttatcgatagagac
tggttaattaaatataatgaaggactaattttactatcaggagctcgaaaaggtgatgtt
ggtaaacatttgatactcggcaatatgatacaagtaaaaaaacgattatcgttctacgaa
cgttattttacgaatcgttattatctagagataatacgtactggacgtattgatgaagaa
aaatacttacattctgcagtttcgttagcggagcatcatgggttaccgttagtagcaaca
aacgatgtacgtttcaccagccctaacgatttcgaagctcacgagatacgtgtagcaatt
cataacggagtaaatcttgatgatgttaaacggcaacgaaattatagtacacaacaatat
atgcgcagcgagaaggaaatgtgcgaattattttctgatttaccggaagcgctggctaac
agcgtagaaattgcacgtcgctgcaatgttactctccgtcttggagaatattttttgcct
aagttcccaacgggaaaaatgtctactgaaaagtatctagtaaaatgcgcgcaagaagga
ctagaggaaagactagtatttttatttcctaatgataaaaaaagaagtgaaaaaagaaaa
gaatacgataaacgtttaaatatagaactaaaagtaataaacaaaatggggtttcctggt
tactttttaatagtaatggagttcatacagtggtcaaaaaataacaacgttccggtaggt
ccaggacgcggatctggagcaggttcactagtagcttatgctttaaaaatcactgatcta
gacccaattgctttagatttgctttttgaacgtttcttaaacccagaacgcgtatcaatg
cctgatttagacgttgacttctgtatggataaaagagatatagtaattgaacacgtagct
aaaacctatggacgcaacgctgtttcacagattataacattcggtactatgacggctaaa
gccgtaattcgcgatgtgggacgtgttttaggtcatccatacggttttattgatcgtata
tccaagctagtacctaatgatataggtattactatagaaagagctttagtaactgagcca
caactacaagctatttataacgccgataaaaatgttaaagatcttattgataaagctcgt
aagctcgaaggtgtaactagaaatgcaggaaaacacgcagggggagtagttattgcacct
accaaaattacagatttcgctccgctttactgcgatactgaaggcaatcatccggttaca
caattcgataaaaatgatgtagagtatgctgggttagttaagtttgactttctaggattg
cgcactttgactattataaactgggctttaggaatgattaacaatcgcctagagcgccaa
ggtttagaacagattgatattgcccatattccgctggaagacaaaaaaagcttcgatatg
cttcaaagatcagaaactactgcagtatttcagttagaatctcgcggcatgaaagatcta
attaaacgcctacaacctgactcttttgaggatatgattgcgctagtagctttattccgc
ccagggcctcttcaatcaggaatggtagataactttataaatcgcaaacatggccgtgaa
actatatcttaccctgatattgagtggcaacacatatctctaaaacctgtactggaacct
acctacggtataattctttatcaggaacaggttatgcaaatagctcaattactagctggc
tatacactaggtggcgcagatatattacgtagagcaatgggaaaaaagaaacctgatgaa
atggcaaaacagagatctgtgtttaaagcaggcgctgaaagtattggtgttgatggtgaa
ctttctatgaaaatttttaatctagtagaaaaatttgccggttacggtttcaataaatct
cactctgctgcctatgcgctagtttcatatcagacactatggttaaaagctaattatcct
gcagaatttatggcagcagtaatgacatcagatatagacaatacagaaaaaatattggta
atagttgacgaatgtaaacgtatgggcctaaaaattttaccgccagatatcaacaaaggt
caacattattttcatgttaatgatgatggtgatatagtttacggtatcggtgctataaaa
ggcataggcgaaggacatataaaagaaattattaatgcgcgtaataaagatggtaaattt
agtgatttatttaatttttgctctcgcatagatactaaaaaactaaatagacgggtacta
gaaaagcttattatggctggagcattcgacaaactaggaccacaccgcgctgcattaatg
aatacgctaagtagcgcaattaaagcagctgatcagtataccaaagcagagaatattggt
cagatcgatatgttcggaattatagctgaagtaccatctacagtagaatcttcatctaat
aaattagctccttggccccaaaatgtagtgctagaaggtgagcgcgaaactcttggatta
tacttaactgaccatccaattacccagtatctgcatgaaattgaacaatatacaggaggt
gtgcgcttgaaggatattaagcatactgagtgcggtaaaatagttacagcagcggggctg
gtactatctactaggataatggtaactaaacgcggcaaccagataggaatttgtacatta
gatgatcgttccagcaggctagatgtaatactgtttactgatatattagaaaaataccag
catttactagaaaaagattctattcttattgtgcaaggacaggtaagttttgattctttt
aatagtgtatttaaaattactgcacataaattaatggatattaataaagcacgtaaaaga
tatgtacgggggtctatatcattaaaagataaagcaaactaa
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