Secondary endosymbiont of Trabutina mannipara: TRABTM_A_01200
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Entry
TRABTM_A_01200 CDS
T04494
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
senm
Secondary endosymbiont of Trabutina mannipara
Pathway
senm03420
Nucleotide excision repair
senm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
senm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
TRABTM_A_01200 (uvrD)
03430 Mismatch repair
TRABTM_A_01200 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
senm03400
]
TRABTM_A_01200 (uvrD)
Enzymes [BR:
senm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
TRABTM_A_01200 (uvrD)
DNA repair and recombination proteins [BR:
senm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
TRABTM_A_01200 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
TRABTM_A_01200 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_12
PhoH
Motif
Other DBs
NCBI-ProteinID:
SBT81981
UniProt:
A0A1C3L3Y5
LinkDB
All DBs
Position
I:complement(117432..119408)
Genome browser
AA seq
658 aa
AA seq
DB search
MEVYNILKNLNYKQRKAVTAPKGNFLVLAGAGSGKTKVLVHRIAWLISVKKCSPYSVIAA
TFTNKAAVKMLNCIEYLLSTRHNSMCIGTFHGLAYRLLRSHYQDANLPQNFKIIDSEDQL
RLLKRIIREMNLDDKKWTPIQARWYIDKKKDEGLRPKKDYGNSVEATLQDIYQIYQETCD
RTGIVDFAELMLRSYELWINKQHILNYYRNRFTNILVDEFQDMNKIQYEWIKILVSNNSN
IMIVGDDDQSIYGWRGANIKNIQRFIYDFSNAKIIRLEQNYRSTNNILQAANTLIAHNNS
RLGKILWTKKIEGEPITLYHAFNELDEANFVVNSIKNNYIHGIDLKKCAILYRNNAQSRV
LEETLLQASLAYSIYGGIRFFERQEIKDALSYLRLIDNHNDDSAYERVINMPPRGIGDRT
LDLIRLISKKKKITLWQSSKILLTENLLNKRLNAALRNFLKLLDNLTKEISDLPLYLQTD
RVIRNSGLLEMYEKEKSERGKIRIENLKELVTATSQFQLSYNKKNKDLKPLQSFLSHTVL
EDNKSASSTKDAVQLMTLHSSKGLEFPYVFIVGMEEGMFPNKNSIKDKELLEEERRLAYV
GITRAMEHLTIIYAKKRHINGKEVCYRPSRFISELPYTCFKKHSYVTKMKNKKNCRNI
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
gtggaagtttacaatatactaaaaaatttaaattataaacaacggaaagcagttactgca
cctaaagggaattttttggtgctagcaggtgctggaagcggtaaaactaaagttttggta
catcgtatagcctggttaatatctgttaaaaaatgttctccatattcagtaattgcagca
acatttactaacaaagcagctgttaaaatgctaaattgtatcgaataccttctaagtact
agacacaatagcatgtgtattggcacttttcatggattagcttaccgcttgttgcgttcc
cactatcaggatgctaaccttccgcaaaattttaagattatcgatagcgaagatcagcta
agattattaaaacgcattattcgcgaaatgaatctagatgataaaaagtggacacctatt
caagcaaggtggtatatagacaaaaaaaaagatgaaggtttacgccctaaaaaagattac
ggtaactcggttgaagctactttgcaagatatttatcaaatatatcaagaaacatgcgat
cgtaccgggatagtagattttgctgaattaatgttgcgatcatatgaattatggataaat
aaacaacatattcttaattattatcgtaatcgatttactaatattttagtagatgaattt
caggatatgaataaaattcagtatgaatggattaagatattagttagtaataacagtaat
ataatgatcgttggtgatgatgatcagtctatttatggctggcgtggagctaatataaaa
aatattcagcgatttatttatgatttttctaatgcaaagataatacgattagaacaaaat
taccgttctaccaacaatattttgcaagctgctaatacacttattgctcataataatagc
agattaggaaagattctatggactaaaaaaatagaaggtgaaccaattacactgtatcat
gcttttaacgaactagatgaagctaattttgttgtaaatagtattaagaataattatata
catggtatagatcttaaaaaatgcgctattctttatcgaaataatgctcaatcacgtgta
ttagaagaaacattattacaagctagtctagcttatagtatttatggtggtattagattc
tttgagcgtcaagaaattaaggatgcactttcatatctgcgacttatcgataaccataat
gatgattcagcttatgaaagagtgattaatatgccacctagaggaatcggtgatcgtaca
ctagatttaattaggctgatttctaaaaagaaaaaaataacactttggcaatctagcaaa
atattgcttacagaaaatttactaaacaagcgcttaaatgctgcacttaggaatttttta
aaattgctagataatctaacaaaggaaatttctgatttaccgttatatttacagactgat
agagtaattagaaactccggtttgttggaaatgtacgaaaaagaaaaaagcgaaagaggt
aagatacgtattgaaaatcttaaagaactagttacagccaccagccaatttcaattgagc
tataataaaaaaaataaagatttaaaaccactacaatcttttctatcacacactgttcta
gaagacaataaatcagctagtagtacgaaagatgcagtacaattaatgacattgcattca
tccaaaggacttgaatttccttatgtttttattgtaggaatggaagaaggaatgtttcct
aacaaaaattcaataaaagacaaagaacttctagaagaagaacgtagattagcgtatgtt
ggcatcactcgtgctatggagcatttgactattatttatgcaaaaaaacgccatataaac
ggtaaagaagtctgttatagaccttcacgctttataagcgaattaccatatacgtgtttt
aaaaaacatagttatgtaacaaaaatgaaaaataaaaaaaattgtagaaatatctaa
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