Secondary endosymbiont of Trabutina mannipara: TRABTM_A_01230
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Entry
TRABTM_A_01230 CDS
T04494
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
senm
Secondary endosymbiont of Trabutina mannipara
Brite
KEGG Orthology (KO) [BR:
senm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
senm03021
]
TRABTM_A_01230 (rpoH)
Transcription machinery [BR:
senm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
TRABTM_A_01230 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
UCR_14kD
VpsR
Motif
Other DBs
NCBI-ProteinID:
SBT81984
UniProt:
A0A1C3L3Z3
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All DBs
Position
I:121115..121972
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AA seq
285 aa
AA seq
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MIKYMQILAYVPQGSLEYYVRTANAYPMLTAKEELELAERFHYHSDLEAAKQLILSHLRF
VIHIARNYSGYGLPQADLIQEGNIGLMKAVRRFNPKVGVRLVSFVVHWIKAEIHEYVLRN
WRIVKIATTKAQRKLFFNLRKTKPRLGWFNQKEVEMVAKELGVSSKDVREMESRMADQDI
AFDPTPEDENSEGHTIAPLLYLHDKSSDFADSIEEANWDNHAVDKLSIALRALDERSRNI
IRARWLDDTNKSTLQSLAYKYGISAERVRQLEKNAMKKIRLAIEE
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgattaaatatatgcaaattttagcttatgttccccagggaagtttagaatactatgtt
aggactgctaatgcttatccaatgttaacagcaaaagaagaactagagttggcggaaagg
tttcactatcatagcgatttagaggctgcaaagcaactaatattgtcacatttgcgtttt
gttattcatattgcacgtaattattcaggatatggcctacctcaagctgatttaatccag
gaaggaaatatcggtttaatgaaagcagttagacgttttaaccccaaagtaggggtgcgt
ttggtttcatttgtagttcattggattaaagctgaaattcacgaatacgtattgcgcaac
tggcgtattgtaaaaatagcgactactaaagcacagcgcaaactattctttaatctgcgt
aaaactaaacctagattaggttggtttaaccaaaaagaagtagaaatggtagcaaaagag
ctaggcgtatctagcaaagatgttcgtgaaatggagtcccgtatggctgatcaagacata
gcttttgatccaacaccagaagatgaaaattcagaaggacatactattgctcccttactt
tatttacatgataaatcatctgattttgctgatagcattgaagaggctaattgggacaat
catgctgttgataagttaagtatagctctaagagcacttgatgagcgaagccgtaacatc
atacgtgcgcgttggttagatgatactaataaaagtaccctgcaatcattagcctacaag
tatggtatttcagcagaacgtgtgcgtcaacttgaaaaaaatgcaatgaaaaaaatacgt
ttagcgatcgaggaataa
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