Secondary endosymbiont of Trabutina mannipara: TRABTM_A_01310
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Entry
TRABTM_A_01310 CDS
T04494
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
senm
Secondary endosymbiont of Trabutina mannipara
Brite
KEGG Orthology (KO) [BR:
senm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
senm03032
]
TRABTM_A_01310 (gyrB)
03400 DNA repair and recombination proteins [BR:
senm03400
]
TRABTM_A_01310 (gyrB)
Enzymes [BR:
senm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
TRABTM_A_01310 (gyrB)
DNA replication proteins [BR:
senm03032
]
Prokaryotic type
DNA Topoisomerases
TRABTM_A_01310 (gyrB)
DNA repair and recombination proteins [BR:
senm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
TRABTM_A_01310 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
SBT81992
UniProt:
A0A1C3L3Z0
LinkDB
All DBs
Position
I:132531..134948
Genome browser
AA seq
805 aa
AA seq
DB search
MCNYYTSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNAIDEALAGFCKEIV
VVIHEGNSISVHDDGRGIPTGIHEEEGISAAEVIMTMLHAGGKFDDKSYKVSGGLHGVGI
SVVNALSQKLELIIKREGKIYQQIYHNGVPQFPLKIVGKTDHTGTIVRFWPSFDTFTNKT
EFQYEILAKRLRELSFLNSGISIRLCDKRNYKEDHFHYEGGIKSFIESLNKNKISIHPNI
FYFSTEKDNISVEIALQWNDSFQENIYCFTNNIPQQDGGTHLAGFRTAMTRTINYYLDKE
GYSKKAKINVTGEDIREGIIAIISVKLSDPKFSSQTKNKLVSSEVKAAVESLINDRLFEF
LLENPNDAKIIVEKIIDSARAREAARKAREITRRKGAIIDISGLPGKLADCQEQDPALSE
LYLVEGDSAGGSAKQGRNRKNQAILPLKGKILNAEKARFEKILSSQEVTTLITALGCGIG
KEEYNQDKLRYHNIIIMTDADVDGSHIRTLLLTFFYRQMPKIIEQGHVFIAQPPLYKVKN
GKKEQYFKDHEDMDRYMIAMAVHGATLYANSPKIVIKGKNLENLVTEYYGIQKMIERIEQ
RFPSLLLYSLIYHQVLTKEHLNQKNKVIFWIESLVQILKNNNKHGSIYNFEVKKNYESQL
FEPILRIRTNGVDTDYILGYDFINSNEYLKLKNIGKKLDNLIKIDAFIKRGDRYQQINSF
EQAFEWLIKESRRGLVIQRYKGLGEMNPKQLWETTMDPRRRCMLRVTINDVIAADQLFNT
LMGDTVEPRRMFIQENALKAENIDI
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgtgtaattattatacgtcttcaagtattaaagtacttaaaggtttggatgcagtacgt
aaacgtcctggtatgtatatcggtgatactgatgatggtactggtttacatcatatggta
tttgaagttgtagacaatgctatcgacgaagcacttgctggtttttgtaaagaaatagta
gttgtgattcacgaaggtaattcaatttctgttcatgatgatggaagaggtattccaaca
ggcatacatgaagaagaaggaatatctgcagcagaagttataatgactatgctgcatgcc
ggaggcaaattcgatgataaatcttataaagtatcaggaggtttacacggagtgggtata
tctgtagtaaatgctctatctcaaaaacttgagcttataataaaaagagaaggaaaaata
tatcaacaaatttatcataatggagttccacaatttccactaaaaatagtaggaaaaact
gatcatactggtacaatagtaagattttggccaagttttgatacctttactaataagaca
gaatttcaatatgaaattttagctaaaaggttgcgagaattgtcttttctaaattctgga
atatctatacgattgtgcgataaaagaaattataaagaagatcatttccattacgaagga
ggaatcaaatcttttatagaaagtctgaataagaataaaatttctattcatcctaatatt
ttttatttttctactgaaaaagacaatattagtgtggaaattgcattgcaatggaacgat
agctttcaagaaaatatctactgctttactaataatattccccaacaagacggtggcact
catcttgctggatttcgtactgctatgacacgtacaataaactattatctggataaagaa
ggctacagcaaaaaagctaaaattaacgttactggagaggatatacgtgaaggtattata
gcaataatttcagttaaattatcagatcctaaattttcttcacaaacaaaaaacaaatta
gtttcttcagaggtaaaagctgccgttgaatcattaataaatgatagactttttgaattt
ttactggaaaatccaaatgatgctaaaataatagtagaaaaaattattgactcagctcga
gctcgtgaagctgctcgtaaagcacgtgaaataactcgtcgtaaaggtgccataatagac
atatctggattacctggtaaacttgctgactgccaagaacaagatcctgcactatctgaa
ctttacttagtagaaggtgattcagctggaggttcagctaagcagggacgtaaccgtaaa
aatcaagcgatattacctctaaaaggaaaaattcttaatgctgaaaaagctcgttttgag
aaaattttatcttctcaagaagtaactacgctgataactgctctaggatgtggtataggc
aaagaagaatataatcaagataagttgcgttatcacaatatcattataatgaccgatgct
gatgtcgatggctcacatattcgcactttgttattgacctttttttatcgtcaaatgcct
aaaattattgagcaaggtcatgtatttattgcacaaccgccactatataaagtaaaaaat
ggcaaaaaagaacaatatttcaaagatcatgaggacatggatcgttatatgatagccatg
gcagtgcatggtgccacactatatgctaattcacctaaaatagttataaaaggtaaaaat
ctagaaaatttagttactgagtattatggtatacaaaagatgatagaacgtatagaacaa
cgttttccaagtttgcttctttacagcttaatttaccatcaggtgttaactaaagaacac
ctaaatcaaaaaaataaagttatattctggattgaatctctagtacaaatattaaagaat
aacaataagcatggcagtatttataattttgaagttaaaaaaaattacgaatctcagtta
tttgagccaatattacgaatacgtactaatggtgtagatacagattacatactaggttat
gattttattaacagtaatgagtatttaaaactaaaaaatattggaaaaaaactagataat
cttatcaagatagatgcttttattaagcgtggtgatcgatatcagcaaataaatagtttt
gaacaggcattcgaatggttaataaaagaatcgcgtagaggactagtaatccagcgctat
aaaggactaggtgaaatgaatccaaaacagttatgggaaaccaccatggatccaagaaga
cgttgcatgttacgtgttacaattaatgatgtaattgcagctgatcagctttttaacacg
ctgatgggagatacagtagagccccggcgcatgtttattcaagaaaatgcattaaaagca
gaaaatatagatatttag
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