Salmonella enterica subsp. enterica serovar Newport USMARC-S3124.1: SN31241_13930
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Entry
SN31241_13930 CDS
T02779
Name
(GenBank) Exonuclease sbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
senn
Salmonella enterica subsp. enterica serovar Newport USMARC-S3124.1
Brite
KEGG Orthology (KO) [BR:
senn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
senn03400
]
SN31241_13930
DNA repair and recombination proteins [BR:
senn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SN31241_13930
Archaeal homologous recombinant proteins
SN31241_13930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
ABC_tran
nSTAND3
AAA_15
cobW
AAA_21
TsaE
ABC_ATPase
AAA_22
NTPase_1
GTP_EFTU
Motif
Other DBs
NCBI-ProteinID:
AGS28366
LinkDB
All DBs
Position
complement(1437232..1440372)
Genome browser
AA seq
1046 aa
AA seq
DB search
MKILSLRLKNLNSLKGEWKVDFTAEPFASNGLFAITGPTGAGKTTLLDAICLALYHETPR
LNTVSQSQNDLMTRDTAECLAEVEFEVKGEAWRAFWSQNRARNQPDGNLQAPRVELARCS
DGKIFADKVKDKLEMIATLTGLDYGRFTRSMLLSQGQFAAFLNAKAKERAELLEELTGTE
IYGQISAQVFEKHKSARLELEKLQAQASGVALLADEQLQQLEASLQALTDEEKRLLADQQ
VQQQHLHWLTRKNELHTELHARQQALYAAQEAREKAQPQLAALTLAQPARQLRPHWERIQ
EQTRAVERVRQHSDEVNARLQSAYRLRQRIRACAHRQFTQLNATGQRLKTWLAEHDSIRV
WRSELAGWRALLTQQSHDRAQLSQWQQQLLSDTRQRDALPPLTLDLTPQALAEARALHTR
QRPLRHRLAALQGQILPKQKRQAQLQAAIARHHQEQAQYTQRLADKRLSYKTKAQELADV
RTICEQEARIKDLESQRAHLQSGQPCPLCGSTTHPAIAAYQALELSANQTRRDALEKEVK
TLAEEGAALRGQLDALTQQLQRDESEAQSLLQEEQALTEEWQTLCATLGVQLQPQEDLAG
WLTAAEEHEQQLDQLSQRHALQTQIAAHTEQVARFTAQIAQRQASLTADLAQYTLSLPAP
EDEASWLNERADEAKIWQQRQTEFADLQTQIDRLAPLLETLPQTDTADSDDDVPLDNWRQ
AHDECVSLQSQLQTLQEQTTQEQQRAAEAIAHFDAALKNSPFDSQATFLAALLDEETVTR
LEKQQQTLESQLQQAKALSAQSAQALADHQQQPPAGLDPTCTAEQLAQRLTQLAQQLREN
TTRQGEIRQQIKQDADNRQRQRALMAEMKQASQQVEDWGYLNALIGSKEGDKFRKFAQGL
TLDNLVWLANHQLTRLHGRYLLQRKASDALELEVVDTWQADAVRDTRTLSGGESFLVSLA
LALALSDLVSHKTRIDSLFLDEGFGTLDSETLDAALDALDALNASGKTIGVISHVEAMKE
RIPVQIKVKKINGLGYSKLDKTFAVE
NT seq
3141 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattctcagtttgcgtctgaaaaacctgaactcgctgaaaggagaatggaaggtc
gattttaccgccgaaccgtttgccagtaacgggttattcgctattaccggcccgaccggc
gcgggaaaaaccaccttacttgacgccatctgcctggcgctgtaccacgaaacgccgcgc
ctgaatacggtatcgcagtcacaaaacgatttgatgacgcgcgatacggcggaatgtctg
gccgaagtggagttcgaggtaaaaggcgaagcctggcgcgcgttctggagccagaaccga
gcccgaaatcagcctgacggcaatctccaggccccacgcgtggagctggcgcggtgttca
gacggaaagatctttgccgataaggtaaaggataaactggagatgatcgccacgttgacc
gggctggactacgggcgcttcacccgttcgatgttgttatcacaggggcagttcgccgcc
tttcttaacgccaaagcgaaagagcgcgcagagcttctggaggagctcaccggcactgag
atttacgggcagatctccgcacaggtatttgaaaaacataaatcagcccgtctcgaactg
gaaaagttacaagcgcaggccagcggcgtcgccctattggcggacgaacagttacagcaa
ctggaagctagtttgcaggcgcttactgacgaagagaaacgcctgctggccgaccagcag
gtacagcagcagcaccttcactggctgacccgaaaaaacgagctccacactgaattacac
gcccggcagcaggcgctgtacgcggcgcaagaggcgcgagaaaaagcgcagccgcagctc
gcggcgctgactctggcgcaacctgctcgccagttgcgtccgcattgggagcgcattcag
gaacaaacccgcgccgttgagcgtgttcgccagcacagtgatgaagtgaatgctcgctta
caaagcgcgtatcgcctgcgccagcgtatccgcgcctgcgcgcatcgacaattcacacaa
ctgaacgccacagggcagcggttgaagacatggctggcggaacacgacagcatccgcgtc
tggcgcagcgaactggcggggtggcgagcattattaacacaacaatcccacgaccgggcg
caactgagccaatggcaacagcagttgctgagcgatacgcgtcagcgtgatgcgctaccg
ccgctcacgctcgacctcacgccacaggcgctggcggaagccagggcattgcatacccga
cagcgtccgctacgccatcgtctcgccgcgcttcaggggcaaattctcccgaaacaaaag
cgtcaggcgcagctacaggcagctatcgcgcgtcatcatcaggagcaggcgcaatacacc
caacgtctggcggataagcgcctgagttataagactaaagcgcaggagcttgcggacgtt
cgcactatttgcgagcaggaggcgcgcatcaaagatctggaaagccagcgggcgcactta
cagtccggccagccgtgtccgctttgcggctcgacgacgcaccccgccatcgccgcctat
caggcgctggaactgagcgcgaatcaaacccgccgcgacgcgctggaaaaagaggtcaaa
acgctggcggaagaaggcgcggcgctgcgaggacagttagatgccttaacgcaacaatta
cagcgggatgaaagcgaggcgcagtcgttgttgcaggaggagcaagcgcttactgaggaa
tggcaaacgctgtgcgctacgctgggcgttcagctccagccgcaagaagacctagcgggc
tggctgaccgccgcggaagagcatgagcaacagttggatcagctcagccagcgtcatgct
ctacaaacgcaaatcgcggcgcatactgaacaggtagcgcgctttaccgcgcagattgcg
cagcgtcaggcgtcgctgacggctgatttggcgcagtatacgctttcccttcctgcgcca
gaagacgaggcttcgtggctgaatgagcgcgccgacgaagcgaaaatatggcaacagcgt
cagacagagttcgcggatttgcaaacgcagatcgacaggcttgccccgttgctggagacg
ctaccgcaaacggataccgcggattccgacgacgacgtgccgctggataactggcggcag
gcgcatgatgagtgcgtgtcattacaaagccagttgcaaaccctgcaggaacaaacgacg
caggagcagcagcgcgccgccgaggcgatagcgcactttgatgcggcgttaaaaaatagc
ccgtttgacagccaggcaacgttcctggcggcgttgctggatgaagagaccgtgacccgt
ctggaaaaacaacaacaaacgctggaaagtcagctacaacaagcgaaggcgttaagcgcg
cagtccgcgcaggcgctggctgaccatcagcaacagccgcccgccggtctggacccaacg
tgtacggcggagcagctcgcgcagcggctgacgcagttggcgcaacaactgcgcgaaaac
acgacacgccagggggaaatccgccagcaaattaaacaggatgcagataatcggcagcgc
caacgcgcgctgatggcggaaatgaagcaagcctctcagcaagtggaagactggggctat
ctcaatgcgctgatcggctctaaagaaggtgataagttccgcaaattcgcccagggactg
acgctggataatctggtctggctggcgaatcatcagctcacccgcctgcatggccgttat
ttattgcagcgcaaagccagcgacgcgctggaactggaggttgtcgatacctggcaggcc
gacgccgtgcgcgatacgcgaacgttatcaggcggcgaaagtttcctggtcagcctggcg
ctggcgctggcgttatcagatttggtcagccataaaacgcgcattgattctttgttcctg
gacgaaggcttcggcacgcttgatagcgaaacgctggacgccgcgctggatgcgctcgac
gcgctgaatgccagcgggaagaccatcggtgtgattagccacgtggaagccatgaaagaa
cgtatccctgtgcagataaaagtgaaaaaaatcaatgggcttggttatagcaaactggac
aaaacgtttgccgtggagtaa
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