Salmonella enterica subsp. enterica serovar Newport USMARC-S3124.1: SN31241_17090
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Entry
SN31241_17090 CDS
T02779
Name
(GenBank) Deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
senn
Salmonella enterica subsp. enterica serovar Newport USMARC-S3124.1
Brite
KEGG Orthology (KO) [BR:
senn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
senn03400
]
SN31241_17090
Enzymes [BR:
senn01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
SN31241_17090
DNA repair and recombination proteins [BR:
senn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
SN31241_17090
Prokaryotic type
SN31241_17090
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AGS28682
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Position
1765979..1767400
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AA seq
473 aa
AA seq
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MPTHLVWFRRDLRLQDNLALAAACRDASARVLALYISTPAQWQAHDMAPRQAAFISAQLN
ALQTALAEKGIPLLFHEVADFNASIETVKNVCRQHDVSHLFYNYQYEFNERQRDAAVEKT
LPSVICEGFDDSVILAPGAVMTGNHEMYKVFTPFKNAWLKRLKEDIPPCVPAPKIRVSGA
LSTPLTPVSLNYPQQAFDAELFPVEENAVIAQLRQFCAQGADEYALRRDFPAVDGTSRLS
ASLATGGLSPRQCLHRLLAEQPQALDGGPGSVWLNELIWREFYRHLMTWYPALCKHQPFI
RWTKRVAWQENPHYFQAWQKGETGYPIVDAAMRQLNATGWMHNRLRMITASFLVKDLLID
WRLGERYFMSQLIDGDLAANNGGWQWAASTGTDAAPYFRIFNPTTQGERFDRDGEFIRQW
LPALRDIPGKAIHEPWRWAEKAGVVLDYPRPIVEHKQARIATLSAYEAARKGA
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgcccacccatttagtctggttcaggcgcgatctgcgtttacaggataaccttgcgctg
gccgccgcctgccgcgatgcatccgcgcgggtgctggcgctttatatttccacccccgcg
cagtggcaggcccatgatatggcgccgcggcaggcggcattcatcagcgcgcagctcaat
gcgctacagacggcccttgcagagaaaggcattccgttgctgtttcatgaagtggcggat
tttaacgccagtattgaaacggtcaaaaacgtttgccgacagcatgacgtcagccatctg
ttttataactatcagtatgagtttaacgagcgtcagcgtgatgcggcggtggaaaaaacg
ctgccctctgtcatctgcgaaggctttgacgatagcgtgattctggcgcccggcgcggtg
atgaccggcaatcatgaaatgtataaagtttttacgccgtttaaaaatgcctggttgaaa
cggctaaaagaagatatcccgccgtgcgttccggccccgaagatccgggtgagcggcgcg
ctttctacacccttaacgccagtctcgcttaactacccgcaacaggcgtttgacgccgag
cttttcccggtggaagaaaacgcggtcatcgcgcagctacgtcagttttgcgcgcagggc
gcagacgagtacgcgttacggcgcgatttccctgcggttgacggcaccagtcggctttcc
gccagcctggcgacgggcggcctgtcgccgcgacagtgcctgcaccgattactggcggag
cagccgcaggcgctggacggcgggccgggaagcgtctggttgaatgagctcatctggcgg
gaattttaccgtcatttaatgacctggtatccggcattatgcaaacaccagccgtttatc
cgctggacaaaacgcgtcgcgtggcaggaaaacccgcactattttcaggcatggcagaaa
ggcgaaaccggttatcccattgtcgatgcggcgatgcgccagcttaacgcgacgggctgg
atgcataaccgtttacgcatgattaccgccagctttctggtaaaagatctgttgattgac
tggcggttgggggagcgctatttcatgtcgcagcttattgacggcgatcttgccgccaat
aatggcggctggcagtgggccgcctcaaccggtactgacgccgcgccttattttcgtatt
tttaatcccacgactcagggagagaggttcgatcgcgacggcgaatttatccgccagtgg
ctaccggcattacgcgatatccctggaaaagcgattcacgagccgtggcggtgggcggaa
aaagcgggagtcgtgcttgattatcctcggcctattgtggagcacaaacaggcgagaatc
gcaacgctttccgcctatgaggcggcgagaaaaggggcgtga
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