Salmonella enterica subsp. enterica serovar Newport USMARC-S3124.1: SN31241_19240
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Entry
SN31241_19240 CDS
T02779
Name
(GenBank) HTH-type transcriptional regulator ybjK
KO
K23778
TetR/AcrR family transcriptional regulator, regulator of biofilm formation and stress response
Organism
senn
Salmonella enterica subsp. enterica serovar Newport USMARC-S3124.1
Brite
KEGG Orthology (KO) [BR:
senn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
senn03000
]
SN31241_19240
Transcription factors [BR:
senn03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
SN31241_19240
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GFIT
Motif
Pfam:
TetR_C_31
TetR_N
TetR_C_6
Acyl_CoA_thio
TARSH_C
Motif
Other DBs
NCBI-ProteinID:
AGS28897
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Position
1970060..1970692
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AA seq
210 aa
AA seq
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MELIMKENAVRRANDPKRREKIIQATLEAVKTYGVHAVTHRKIAAIAQVPLGSMTYYFAG
MDALLSEAFTLFTENMSRQYQDFFAQVTDAEGACQAITEMIYGSQVTTPDNMALMYQLYA
YASDKPALKIVMQNWMQRSQNTLAQWFDAQTARALDAFIEGMTLHFVTDRTPLAREAILQ
MVKRIAGEPMSCHSASGNKKPINLEPKWRG
NT seq
633 nt
NT seq
+upstream
nt +downstream
nt
gtggaactcatcatgaaagaaaatgccgtaagacgcgccaatgatcctaagcgacgggaa
aaaataattcaggccacactggaagcggtaaagacctatggcgttcatgccgtgacgcac
cggaaaatcgccgctatcgctcaggtgccgcttggctcgatgacctactattttgccggt
atggatgcgttattgagtgaagcttttacacttttcaccgagaacatgtcgcgtcaatac
caggacttttttgcgcaggtgacggatgcggagggggcgtgccaggcgataacggaaatg
atttacggctcgcaggttacgacgccggataatatggcgttaatgtatcagttatatgcc
tatgccagcgataagccagcgttaaaaatagtcatgcaaaactggatgcagcgtagccag
aatacgctggcgcagtggtttgacgcacagaccgcccgcgcgctggatgcgtttatcgag
gggatgacgctgcattttgtgacggatcgaacgccgctggcgcgtgaagcgattttacag
atggtaaagcgaatcgccggagagccaatgtcgtgtcactctgcgtcgggcaacaaaaaa
cccatcaaccttgaaccgaaatggcggggttga
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