Salmonella enterica subsp. enterica serovar Newport USMARC-S3124.1: SN31241_20080
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Entry
SN31241_20080 CDS
T02779
Name
(GenBank) L,D-transpeptidase YcbB
KO
K21470
L,D-transpeptidase YcbB
Organism
senn
Salmonella enterica subsp. enterica serovar Newport USMARC-S3124.1
Brite
KEGG Orthology (KO) [BR:
senn00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
senn01002
]
SN31241_20080
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
senn01011
]
SN31241_20080
Peptidases and inhibitors [BR:
senn01002
]
Cysteine peptidases
Family C82
SN31241_20080
Peptidoglycan biosynthesis and degradation proteins [BR:
senn01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
SN31241_20080
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Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
AGS28981
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Position
2069193..2071112
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AA seq
639 aa
AA seq
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MVAVDPRCGQHSHAEYDNENRGQGMLLNKMCGRCLSAISLCLAVTFAPLFNAQADEPEMI
PGDSAVAATDQAGPQKQSAATAIMAGIQPLPEGVSAEKVRADLQSQLPSGYTPVYMSQLT
LLYAARDMKPMWDNRDAVKAFQQQLAEVAIAGFQPQFTAWVALLTDPAVNGMARDVVLSD
AMMGYLHFIANIPVKGQRWLYSNKPYALATPPVSVINQWQIALEEGQLPMFVASLAPQHP
QYAPMHDALLKLVADSRPWPQLANTATLRPGQWSNDVPALREILQRTGMLDGGPKIALPG
DNTADSAVVSPSAAVVETSVAQPVDEPTARRSKSAPAARAYDRELVEAVKRFQAWQGLGA
DGVIGPATRNWLNMTPAQRAGVLALNIQRLRLLPAELSTGIMVNIPAYSLVYYQNGNQVL
ASRVIVGRPDRKTPMMSSALNNVVVNPPWNVPPTLARKDILPKVWNDPGYLERHGYTVMR
GWNSKEAIDPWQVDWATITPSNLPFRFQQAPGAHNSLGRYKFNMPSSDAIYLHDTPNHTL
FQRDARALSSGCVRVNKASELANMLLQDAGWNDARISGALKQGDTRYVNIRQNIPVNLYY
LTAFVGADGRMQYRTDIYNYDLTARSSAQIVPKVEQLIR
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
ttggttgcggttgacccgcgctgcgggcagcacagtcatgcggagtatgataacgaaaac
agggggcaagggatgttgcttaacaagatgtgtggtcgttgtctgtcggcaatcagttta
tgcctggccgtaacattcgctccactgttcaatgcgcaggccgatgagcctgaaatgata
cctggcgatagcgccgttgccgcgacggatcaggctgggccgcagaagcaatccgccgcg
acggcgattatggccgggattcagccgctgccggagggcgtttcagccgagaaagtccgg
gctgatttacagtcgcagcttccttccggctatacgccggtctatatgagccagctgaca
ttgctgtatgccgcgcgcgacatgaagcccatgtgggataatcgcgatgcggtgaaagcc
ttccagcaacagttggcggaggtggcgattgccggattccagccgcagtttaccgcctgg
gtggcattgttgaccgatcccgccgtaaacggtatggcgcgcgatgttgtgttgtcagac
gccatgatgggctatctccatttcattgcgaatatccccgtcaaaggccagcgctggtta
tatagcaacaaaccttacgcattggcgacgccgccagtctcggtgattaaccagtggcaa
atcgcgctggaagaggggcagttgccgatgtttgtcgccagcctggcgccgcagcatcca
cagtatgcgcccatgcatgacgcgttgctgaagctggtggcggactctcgcccgtggccg
cagttggccaataccgcgacgctgcgcccggggcaatggagtaacgatgtgcctgcgctg
cgcgaaatattacagcgtacggggatgctggatggcggtccaaagatagccttacccggc
gataacactgctgatagtgccgtcgtcagcccctccgccgcggtagtcgaaacatcggtg
gcgcagccggtcgacgaaccaacggcccgccgtagtaagtcggctccggcggcacgcgcc
tacgatcgtgagctggtcgaggcggtaaagcgttttcaggcatggcaagggctgggggcg
gatggcgttattggcccggcgacgcgtaactggcttaatatgacccccgcgcaacgcgca
ggcgtactggcactgaatatccaacgtttacgcctgctgccggcggaactctctaccggt
attatggtaaacattcccgcttattcgctggtctactatcagaatggcaaccaggtgctg
gcttcaagggtgatcgtcgggcgtcccgatcgtaaaacgccgatgatgagcagcgcgctg
aataatgtggtggtgaacccgccgtggaacgttccgcccacgcttgcgcgtaaagacatt
ttaccgaaggtgtggaatgacccaggctatctggagcgccatggctacaccgtgatgcgc
ggctggaacagcaaagaagcgatcgatccgtggcaggttgactgggccaccattacgcca
tcgaatcttccgttccgtttccagcaggcgccaggcgcgcacaattcgctggggcgttat
aaatttaatatgccgagttcagatgctatctatctgcacgatacgcctaaccatactctc
tttcagcgtgacgccagggcgttaagttccggctgcgtgcgggtcaataaggcctctgag
ctggcgaatatgctcttgcaggatgctggctggaacgatgcgcggatctcaggcgccctg
aagcaaggcgacacgcggtatgtcaatatccggcagaacattccagtaaatctttactat
ctgaccgcatttgtcggcgcagatggacgtatgcaatatcgtacagatatttacaattac
gatctcacagcgcgatccagcgcacaaattgtgccaaaggttgaacaattaatcaggtaa
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