Salmonella enterica subsp. enterica serovar Newport USMARC-S3124.1: SN31241_29860
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Entry
SN31241_29860 CDS
T02779
Name
(GenBank) Transcriptional regulator
KO
K19337
RpiR family transcriptional regulator, carbohydrate utilization regulator
Organism
senn
Salmonella enterica subsp. enterica serovar Newport USMARC-S3124.1
Brite
KEGG Orthology (KO) [BR:
senn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
senn03000
]
SN31241_29860
Transcription factors [BR:
senn03000
]
Prokaryotic type
Helix-turn-helix
Other families
SN31241_29860
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Gene cluster
GFIT
Motif
Pfam:
HTH_6
SIS
SIS_2
HTH_29
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
AGS29958
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Position
3011940..3012809
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AA seq
289 aa
AA seq
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MNMLEKVQSQLEHLSKSERKVADVILAAPGRSIHLSIAMLAQEANVSEPTVNRFCRSMNT
RGFPDFKLHLAQSLANGTPYVNRNVDEDDSVEAYTGKIFESAMASLDHVRQSLDKSAVNR
AVDLLTQAKKIAFFGLGSSAAVAHDAMNKFFRFNVPVIYSDDIVLQRMSCMNCNDDDVVV
LISHTGRTKSLVELAQLARENDAMVIALTSAGTPLAREATLAITLDVPEDTDIYMPMVSR
LAQLTVIDVLATGFTLRRGAKFRDNLKRVKEALKESRFDKELLIRSDDR
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgaatatgctggaaaaagtccagtctcaactggaacatttaagcaaatctgaacgaaaa
gtcgccgatgttattctggccgccccaggcagatcgattcacttaagcattgccatgctg
gcccaggaagctaacgttagcgagccaacggtgaaccgtttctgtcgcagcatgaatacc
cgcggctttcctgattttaaactgcatctggcgcaaagtctggcaaatggcaccccctat
gttaatcgcaatgtggatgaagatgacagcgttgaggcctatacaggaaaaatcttcgag
tccgccatggccagtctcgaccatgttcgtcagtcgctggataaatcggccgtcaaccgc
gccgtcgatttactgacccaggcaaaaaaaatcgccttttttggtcttggttcctccgcc
gcagtcgcgcatgacgccatgaataagttttttcgcttcaatgtgccggtgatttactcc
gacgatatcgtgctgcaacggatgagctgtatgaattgtaacgatgatgacgtcgtcgtg
ctcatttcgcatactggcagaaccaagagcctggtggaactggcgcagttggcgcgggaa
aacgatgcgatggtgatcgccctgacctccgctggaacgccgctggcgcgcgaagccacg
ctggccattaccctcgacgtaccggaagatacagacatttatatgcccatggtctctcga
cttgctcagctgaccgtgatagatgtgctggcaacgggatttactttgcgtcgcggggca
aaattcagagataacttgaagcgtgtcaaggaagcgctcaaggaatcgcgttttgataaa
gaattactcatcaggagtgatgaccgctaa
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