Salmonella enterica subsp. enterica serovar Newport USMARC-S3124.1: SN31241_41060
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Entry
SN31241_41060 CDS
T02779
Name
(GenBank) Exodeoxyribonuclease V gamma chain
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
senn
Salmonella enterica subsp. enterica serovar Newport USMARC-S3124.1
Pathway
senn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
senn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SN31241_41060
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
senn03400
]
SN31241_41060
Enzymes [BR:
senn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
SN31241_41060
DNA repair and recombination proteins [BR:
senn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SN31241_41060
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
AGS31077
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All DBs
Position
complement(4162661..4166032)
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AA seq
1123 aa
AA seq
DB search
MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI
AFPLPASFIWEMFVRVLPDIPKESAFSKQSMSWKLMTLLPQLLDKDEFVLLRHYLTDDTD
KRKLFQLSARAADLFDQYLVYRPDWLTQWEAGKTVEGLGEAQNWQAPLWKALVEYTAALG
QPRWHRANLYQRFIQTLESATACPPGLPSRVFICGISALPPVYLRALQALGKHIEIHLLF
TNPCRYYWGDIKDPAWLAKLMARQRRHSFEDRHLPLFRENQNPEALFNSDGEQDIGNPLL
ASWGKLGRDYIYLLSELENSQELDAFVDITPDNLLHRIQADILELESHAVAGVNLEEYSR
SDNKRLLDPEDNSLSFHVCHSPQREVEILHDRLLAMLEADPTLTPRDIIVMVADIDSYSP
FIQAVFGSAPTERYLPYAISDRRARQSHPVLQAFISLLSLPDSRFVSEDVLALLDVPVLA
ARFTINEEGLRYLRLWVNESGIRWGIDDDNVRELELPATGQHTWQFGLTRMLLGYAMESA
QGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMLNDFFL
PDADTEAAMTLIEQQWQAIIAEGVAAEYGDAVPISLLRDELAQRLDQERISQRFLAGPIN
ICTLMPMRSIPFRVVCLLGMNDGVYPRQLAPLGFDLMSQKPMRGDRSRRDDDRYLFLEAL
ISAQQTLYISYIGRSIQDNSERFPSVLVQELVDYIGQSHYLPGDETLTCDESEARVKAHI
TRLHTRMPFDAQNYQPGEQQSYAREWLPAASQSGKAHSDFVQPLPFTMPETLTLESLQRF
WAHPVRAFFQMRLQVNFRSEESEIPDAEPFELEGLTRYQLNQQLLNTLVEEDDAERLFRR
FRAAGELPYGAFGEIFWDAQCQEMQQLASRVIACRKPSQSLEVDLLCNGVQLTGWLPQVQ
EDGLLRWRPALISVAQGVKLWLEHLVYCASGGSGESRLFLRKEGEWRFPPLDKAQAMAYL
AQLIEGYREGMSSPLLVLPESGGAWIKACYDAENDVMLDDDDTLQKARTKFLQAYEGNMM
VSGEGEDIWYQRLWRQLESETLQAIIAQSRHYLLPLFRFNQSR
NT seq
3372 nt
NT seq
+upstream
nt +downstream
nt
atgttaagggtctaccactccaatcgtctggatgtgctggaagcgttgatggaattcatc
gtcgaacgcgagcggctggatgatccctttgaaccagaaatgattctggtacaaagcacg
ggtatggcgcagtggctgcagatgaccctttcacaaaagtttggtattgcggcgaatatc
gcttttccgttaccggcgagttttatctgggagatgtttgtccgcgtgttgccggatatt
cccaaagaaagcgctttcagcaaacaaagcatgagctggaaactgatgaccttgctgccg
cagttgctggataaggatgagtttgtactgctgcgccattatctgaccgacgacaccgat
aaacgcaaactctttcagctttccgcgcgcgccgccgacctgttcgatcagtatctggtt
tatcggcctgactggcttacgcagtgggaagcgggaaaaaccgtggaaggtctgggagag
gcgcaaaactggcaggcgccgctgtggaaagcattggtggaatataccgccgcgctgggg
cagccgcgctggcatcgcgccaatctctaccaacgctttattcaaacgctggaaagcgcg
accgcctgcccgccagggttgccgtcccgcgtttttatttgcggcatttccgcgttaccg
ccagtgtatctcagagcattgcaggcgctgggtaaacatattgaaatccatctccttttt
actaatccgtgtcggtattactggggggatataaaagacccagcctggctggcaaaactc
atggctcgccagcgtcgtcacagttttgaagaccgtcatttaccgttgttccgtgaaaac
cagaatccggaagccttatttaacagcgacggcgaacaggatatcggtaatccgctactg
gcctcatggggaaaactgggacgggattatatctacctgctatctgaactggaaaacagc
caggagctggatgcgtttgttgatattacgccagataatcttttgcatcggattcaggcg
gatatccttgaactggaaagccatgcggtggcgggcgtaaatcttgaggagtattcgcgc
agcgacaataagcgtctgctcgatcccgaggataacagcctctcttttcacgtttgtcac
agcccgcagcgcgaggtggaaatactgcacgatcgcctgctggcgatgctggaagccgat
ccgacactaacgccgcgcgacattatcgttatggtggctgatattgacagctatagcccg
tttatccaggcggtgtttggtagcgcgccaacggagcgctatctgccttatgccatttcc
gatcggcgggcgcgtcagtcacatccggtgttacaggcatttatcagcctactttcgtta
ccggacagccgctttgtctccgaggatgttctggcgttgttagacgtaccggtattggct
gcccgctttacgatcaacgaagaagggttgcgttatttgcgcttgtgggtcaatgagtca
ggcattcgctggggaattgacgatgacaacgtacgcgagctggaacttcctgccacgggg
cagcatacgtggcaatttggcctgacgcgtatgctgctggggtatgcgatggaaagcgcc
cagggcgagtggcagtcggttctgccttatgacgaatccagcggtctgattgctgagctg
gtcgggcatctggcttcgctgctgatgcagcttaatatctggcggcgcggtctggcgcag
gagcgaccgctggaagagtggttgcccgtttgtcgcgatatgctcaatgatttcttcctg
cccgatgcggacacggaagcggcaatgacattgattgaacagcagtggcaggccattatc
gccgaaggcgtcgcggcggaatatggcgacgcggtaccgatttcgctactgcgggatgaa
ctggcgcagcgtctggatcaggaacgtattagccagcgcttcctggcgggccccatcaat
atttgtacgctgatgccgatgcgttccattccgtttagagtcgtttgcctgctgggaatg
aacgacggcgtatacccgcgccagcttgcgccgttgggctttgacctgatgagccaaaaa
cccatgcgcggggatcgtagccgtcgcgacgatgaccgctacctgtttctggaagcgtta
atttcggcgcagcagacgctgtatatcagctacatcggtcgctccatccaggataatagc
gaacgctttccctctgtactggtgcaagaattggtggattacatcgggcaaagccactat
ttgccgggcgacgaaacgctgacctgtgatgagagcgaagcacgagtcaaagcgcatatt
acgcgtctgcatacccgtatgccttttgatgcgcaaaattaccaacccggcgaacagcaa
agttatgccagagagtggttgcctgcggcgagtcagtcggggaaagcgcattctgacttt
gtgcagccgcttccttttacgatgccggaaacattgactctggaaagtctgcagcgtttt
tgggcccatccggtacgcgcattttttcagatgcggcttcaggttaatttccgctcggaa
gagagtgagattcctgatgcggaaccgtttgaattagagggattgacgcgatatcaactt
aaccaacagttgctcaatacgctggttgaagaggacgacgccgaacgcttgttccgccgt
ttccgggctgcgggagagttgccttacggcgcgtttggcgaaatattctgggatgcgcaa
tgtcaggagatgcagcaactggcaagccgggttatcgcctgtcgtaagccgagccaaagc
ctggaagtggatctgctttgcaatggcgttcagctaaccggctggctaccgcaggtacag
gaggatggattattgcgctggcgtcccgctttaatcagcgtggcgcaaggtgtgaaactt
tggctggaacaccttgtctattgtgccagcggcgggagtggcgaaagtcgtctgtttttg
cgcaaagagggagaatggcgatttccgccacttgataaagcgcaggcaatggcttacctg
gcgcaactgattgaaggctaccgggaaggcatgtcttctccgctattggtactgccggaa
agcggcggcgcatggataaaagcctgttatgacgctgaaaatgatgtcatgttagacgac
gatgacaccttacagaaggccagaacaaagtttctacaggcttatgaaggcaacatgatg
gtgagcggcgaaggcgaagatatctggtatcaacgtctttggcgtcagctggaatctgaa
acgttgcaggctatcattgcgcagtcccgacattacctgttaccgctgtttcgttttaat
cagtctcgttga
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