Salmonella enterica subsp. enterica serovar Newport USMARC-S3124.1: SN31241_46110
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Entry
SN31241_46110 CDS
T02779
Name
(GenBank) Autoinducer 2-binding protein lsrB
KO
K10555
AI-2 transport system substrate-binding protein
Organism
senn
Salmonella enterica subsp. enterica serovar Newport USMARC-S3124.1
Pathway
senn02010
ABC transporters
senn02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
senn00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SN31241_46110
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SN31241_46110
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
senn02000
]
SN31241_46110
Transporters [BR:
senn02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
AI-2 transporter
SN31241_46110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
Glyco_tran_WecG
DUF6848
Peripla_BP_6
Motif
Other DBs
NCBI-ProteinID:
AGS31579
LinkDB
All DBs
Position
complement(4684857..4685891)
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AA seq
344 aa
AA seq
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MEKKMARHSIKMIALLTAFGLASAAMTVQAAERIAFIPKLVGVGFFTSGGNGAQEAGKAL
GIDVTYDGPTEPSVSGQVQLVNNFVNQGYDAIIVSAVSPDGLCPALKRAMQRGVKILTWD
SDTKPECRSYYINQGTPKQLGSMLVEMAAHQVDKEKAKVAFFYSSPTVTDQNQWVKEAKA
KISQEHPGWEIVTTQFGYNDATKSLQTAEGIIKAYPDLDAIIAPDANALPAAAQAAENLK
RNNLAIVGFSTPNVMRPYVQRGTVKEFGLWDVVQQGKISVYVANALLKNMPMNVGDSLDI
PGIGKVTVSPNSEQGYHYEAKGNGIVLLPERVIFNKDNIDKYDF
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atggagaaaaaaatggcaagacacagcattaaaatgatcgccttactcactgcgtttggt
ctggcatctgcggcaatgaccgtgcaggcggcagagcggattgcttttattcccaagctg
gttggcgtgggcttttttaccagtggcggcaatggcgcgcaggaagcgggaaaagcgctg
ggcattgacgtaacttacgatggccctacagagcccagcgtctcaggccaggttcaactg
gtgaataactttgtcaatcaggggtatgacgccattatcgtttctgccgtttcgcctgac
ggcctgtgcccggcgttgaagcgggcaatgcaaagaggcgtgaaaatattaacctgggat
tccgataccaagccggagtgccgttcttactatattaatcaagggacgccaaaacagctc
ggcagcatgctggtagagatggccgctcatcaggtggacaaagagaaagcgaaagtcgct
ttcttctattccagcccaacggtgaccgaccagaaccagtgggtaaaagaagctaaagcc
aaaattagccaggaacatccggggtgggagatagtcactacccagtttggctataacgat
gccacgaaatcgctccagacggcggaaggtatcatcaaagcgtatcccgatctggatgcc
atcatcgcgcctgacgctaacgctttacctgctgcggcacaggcggcggagaaccttaaa
cgcaataatctcgcgattgttggttttagtacgccgaatgtaatgcgcccttatgttcag
cgcggcactgttaaagagtttggcctgtgggatgtcgtccaacagggaaaaatttccgta
tatgtcgccaatgcgttgctgaaaaatatgccaatgaatgtcggtgattcactggatatt
cccggcatcggcaaagtcaccgtttcacctaatagtgagcagggatatcactatgaggca
aaaggtaacggcattgtgttattgccggagcgtgtcattttcaacaaagacaatatcgac
aaatatgatttctga
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