Salmonella enterica subsp. enterica serovar Newport USMARC-S3124.1: SN31241_47120
Help
Entry
SN31241_47120 CDS
T02779
Name
(GenBank) HTH-type transcriptional regulator yihW
KO
K27243
DeoR family transcriptional regulator, sulfoquinovose operon repressor
Organism
senn
Salmonella enterica subsp. enterica serovar Newport USMARC-S3124.1
Brite
KEGG Orthology (KO) [BR:
senn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
senn03000
]
SN31241_47120
Transcription factors [BR:
senn03000
]
Prokaryotic type
Helix-turn-helix
DeoR family
SN31241_47120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DeoRC
HTH_DeoR
HTH_11
MarR
MarR_2
HVO_A0114
GntR
HTH_Crp_2
HTH_20
Fe_dep_repress
HVO_A0261_N
HTH_29
HTH_24
HTH_5
HTH_Mga
TrmB
DDRGK
Rrf2
HTH_36
Sugar-bind
RPA_C
SgrR_N
HTH_28
HTH_17
CoA_trans
WHD_RNase_R
TFIIE_alpha
DUF1670
HTH_AsnC-type
Ribosomal_L19e
DnaD_N
DUF4423
HTH_23
Motif
Other DBs
NCBI-ProteinID:
AGS31680
LinkDB
All DBs
Position
complement(4767709..4768512)
Genome browser
AA seq
267 aa
AA seq
DB search
MSLTELTGNPRHDRLLMLIDERGYMNIDELASLLEVSTQTVRRDIRKLSEQGLITRHHGG
AGRASSVVNTAFEQREVSWTQEKKAIAEAVADYIPDGSTIFITIGTTVEQVARALLNHNH
LRIITNSLRVAHILYNNPRFEVMVPGGTLRPHNSGIIGPSAAAFVAGFRADYLVTSVGAI
ESDGALLEFDVNEASVVKTMMAHSRHILLAADHTKYHASAAVEIGNVSQITALFTDEYPG
PALQNLLQSQQIEVVQVSPSLDDAVSA
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
atgagtcttaccgaactgaccggtaatccgcgacacgatcggctgttaatgctaattgat
gagcgcggctatatgaatatcgatgagttagccagtttgttggaggtctctacccagacg
gttcgccgcgatattcgtaaattaagcgagcaggggctgattacgcgtcatcacggcggc
gctggcagagcgtccagtgtggtcaataccgcctttgagcagcgagaggtctcctggacg
caagagaaaaaagccattgcggaagccgtggctgactatattccggatggctccacgata
tttatcacgattggaacgacggttgagcaggtggcgcgcgcgctgctcaaccataatcat
ctgcgcattatcaccaatagcctgcgcgtcgcgcacattctttataataaccctcgcttt
gaagtgatggtgcctggcggcacgctgcgcccgcataatagcggcattatcgggccatcc
gcggcggcgtttgtggcggggttccgggcggactatctcgtcaccagcgtaggcgcgata
gagagcgatggcgcgttactggagtttgatgtcaacgaagccagcgtagtgaaaaccatg
atggcccactcgcgacatattctgctggccgccgatcatacgaaataccatgcttctgcg
gcggttgagatcggcaatgtgtcacagattaccgctctgtttacggacgagtatccaggt
ccggcattacagaatttacttcaatcccagcaaatcgaagtggttcaggtgagtccttcg
ctggacgacgccgtttcagcgtga
DBGET
integrated database retrieval system
