Salmonella enterica subsp. enterica serovar Newport USMARC-S3124.1: SN31241_4740
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Entry
SN31241_4740 CDS
T02779
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
senn
Salmonella enterica subsp. enterica serovar Newport USMARC-S3124.1
Pathway
senn03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
senn00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SN31241_4740
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
senn03021
]
SN31241_4740
03400 DNA repair and recombination proteins [BR:
senn03400
]
SN31241_4740
Enzymes [BR:
senn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
SN31241_4740
Transcription machinery [BR:
senn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
SN31241_4740
DNA repair and recombination proteins [BR:
senn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
SN31241_4740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
AGS27449
LinkDB
All DBs
Position
484535..485449
Genome browser
AA seq
304 aa
AA seq
DB search
MTLEPLERGFGHTLGNALRRILLSSMPGCAVTEVEIDGVLHEYSTKEGVQEDILEILLNL
KGLAVRVQGKDEVILTLNKSGIGPVTAADITHDGDVEIVKPQHVICHLTDENASISMRIK
VQRGRGYVPASTRIHSEEDERPIGRLLVDACYSPVERIAYNVEAARVEQRTDLDKLVIEM
ETNGTIDPEEAIRRAATILAEQLEAFVDLRDVRQPEVKEEKPEFDPILLRPVDDLELTVR
SANCLKAEAIHYIGDLVQRTEVELLKTPNLGKKSLTEIKDVLASRGLSLGMRLENWPPAS
IADE
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
gtgacccttgagcctttagagcgtggcttcggccatactctgggtaacgcactgcgccgt
attctgctctcatcgatgccgggttgcgcggtgaccgaggttgagattgatggtgtacta
catgagtacagcaccaaagaaggcgttcaggaagacatcctggaaatcctgctcaacctg
aaagggctggcggtgagagttcagggtaaagatgaagttattcttaccctgaataaatct
ggcattggccctgtgactgcagccgatatcacccatgatggggatgtcgaaatcgtcaag
ccgcagcacgtgatctgccacctgaccgatgaaaacgcgtctattagtatgcgtatcaaa
gttcagcgcggtcgtggttatgtgccggcttctacccgaattcattcggaagaagatgag
cgcccaatcggccgtctgctggtcgacgcctgctacagccctgtagagcgtattgcctac
aatgttgaagcagcgcgtgtagaacagcgtaccgacctggacaagctggtcatcgaaatg
gaaaccaacggcacaatcgatcctgaagaggcgattcgtcgtgcggcaaccatcctggct
gaacaactggaagctttcgttgatttacgtgatgtacgtcaaccggaagtgaaagaagag
aaaccagaattcgatccgatcctgctgcgccctgttgacgatctggaattgactgtccgc
tctgctaactgcctcaaggcagaagctatccactatatcggtgatctggtacagcgtacc
gaggttgagcttcttaagacgcctaacctgggtaaaaaatctcttaccgagattaaagac
gtgctggcttcccgtggactgtctctgggtatgcgcctggaaaactggccaccggcaagc
atcgctgacgagtaa
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integrated database retrieval system
