Salmonella enterica subsp. enterica serovar Enteritidis EC20090193: AU37_00960
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Entry
AU37_00960 CDS
T03732
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
seno
Salmonella enterica subsp. enterica serovar Enteritidis EC20090193
Brite
KEGG Orthology (KO) [BR:
seno00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
seno03016
]
AU37_00960
Enzymes [BR:
seno01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
AU37_00960
Transfer RNA biogenesis [BR:
seno03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
AU37_00960
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
AHP72571
LinkDB
All DBs
Position
complement(219527..220057)
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AA seq
176 aa
AA seq
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MSEPKRLFFAIDLPDDARAQIIAWRAAHFASEDGRPVAAANLHLTLAFLGDVSSDKQRAL
AQLAGRIRQPGFTLHLDDAGQWLRSRVVWLGMRQPPRGLLQLANMLRAQAARSGCYQSPQ
PFHPHITLLRDASHTVAIPPPGFCWSFPVTSFALYASSYGQGRTRYAELQRWTLGE
NT seq
531 nt
NT seq
+upstream
nt +downstream
nt
atgtctgagccaaaacggctgttttttgcgattgacttacccgacgacgcgcgcgcacaa
attatcgcctggcgcgccgcccattttgcgtctgaagacggacgccccgtcgcagcggcg
aacctacacctgacgctggcctttttaggcgacgtcagtagcgataagcagcgcgcgctt
gcgcaactggccggacgaattcgccagccgggctttacgctacatctggatgacgccggt
cagtggctgcgttcgcgcgtggtgtggctggggatgcgccagccgccgcgcgggttgttg
cagttggctaatatgctgcgcgcgcaggccgcccgcagcggttgttaccaaagcccgcag
ccttttcacccgcatattacgctgctgcgcgacgccagccatacggtggctatcccgccg
ccgggcttttgctggtcatttccggtcacgtcgtttgcgctttacgcctcttcgtatggg
caaggccgtacccgctatgccgagctgcagcgctggacgctgggcgaataa
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integrated database retrieval system
