Serratia entomophila: KHA73_01825
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Entry
KHA73_01825 CDS
T08209
Symbol
dacB
Name
(GenBank) serine-type D-Ala-D-Ala carboxypeptidase
KO
K07259
serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:
3.4.16.4
3.4.21.-]
Organism
senp
Serratia entomophila
Pathway
senp00550
Peptidoglycan biosynthesis
senp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
senp00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
KHA73_01825 (dacB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
senp01002
]
KHA73_01825 (dacB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
senp01011
]
KHA73_01825 (dacB)
Enzymes [BR:
senp01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
KHA73_01825 (dacB)
Peptidases and inhibitors [BR:
senp01002
]
Serine peptidases
Family S13: D-Ala-D-Ala peptidase C family
KHA73_01825 (dacB)
Peptidoglycan biosynthesis and degradation proteins [BR:
senp01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
KHA73_01825 (dacB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S13
Beta-lactamase2
Transpeptidase
Motif
Other DBs
NCBI-ProteinID:
UIW18725
LinkDB
All DBs
Position
complement(393657..395090)
Genome browser
AA seq
477 aa
AA seq
DB search
MRFSRIVSALACAFVLNANAAPVEDYTQYLPDGANLALVVQKIGATAPTIDYHAQQMALP
ASTQKVLTALAALLQLGPDYRFTTTLESQGSISDGVLRGNLIARFSGDPTFKRQSLRNMV
AVLKKQGVRQITGDVLVDTSVFASHDKAPGWPWNDLTQCFSAPPAAAIVDRNCFSVSLYS
APNPGEMAFIRVASYYPVNMFSQVRTLARGSADAQYCELDVMPGELNRFTLTGCLTQRSE
PLPLAFAIQDGASYAGAILKDELIQAGIQIDGHLKRQTQPGLKGEVIAQTQSAPLHDLLK
IMLKKSDNMIADTVFRTIGHERFGVPGTWRAGADAVRQVLRQKAGVDLGNSIVVDGSGLS
RHNLLAPATMMQALQYIAQHDNELNFISMLPLSGYDGTLRYRGGLHEAGVDGKVSAKTGA
LQGVYNLAGFITTASGQRMAFVQYLSGYAVPPEDQKQRRAPLVRFESRLYRDIYQNN
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgcgtttttcacgaattgtcagtgcattggcttgcgcatttgttctgaatgcgaatgcg
gccccggttgaagattacacacaatatttgcctgatggggccaaccttgccctggtagtt
cagaagatcggcgccaccgcgccgaccatcgattatcacgctcagcaaatggcactgccg
gccagtacccagaaggtgctgacagcgctggcggcattgctgcagctcgggccggactac
cgcttcaccaccacgctggagagccagggcagcatcagcgacggcgtgctgcgcggcaac
ctgatcgcccgcttcagcggcgatccgaccttcaagcgccaaagcctgcgcaacatggtg
gcggttcttaagaaacagggcgtgcgccagattaccggcgacgtgctggtcgacacctcg
gtgttcgccagccacgacaaggcgcccggctggccgtggaacgacctgacgcagtgcttc
agcgccccaccggcggcggcgattgtcgatcgcaactgcttctcggtgtcgctgtacagc
gcgccgaacccgggcgagatggcgtttatccgcgtcgcctcctattacccggtcaatatg
ttcagccaggtgcgcacgctggcgcgaggctctgccgacgcccaatattgcgaactggac
gtgatgccgggcgagctgaaccgctttaccctgaccggctgcctgacgcagcgcagcgag
ccgctgccgctggccttcgccattcaggacggcgccagctatgcgggtgctatcctgaaa
gatgagctgatacaggcgggcatccagatcgacggccacctgaagcgccagacccagccg
ggccttaaaggcgaggtgatagcgcagacccagtcggcgccgctgcatgacctgctgaaa
atcatgctgaaaaaatcggacaacatgattgccgataccgtattccgcaccatcggccac
gagcgcttcggcgtaccgggcacctggcgcgcgggcgccgacgcggtgcggcaggtgcta
cgccagaaggccggcgtcgatctgggcaacagcatcgtggtggacggctcaggcctgtcg
cgccacaacctgctggcgccggcgaccatgatgcaggcgctgcagtacattgcgcagcat
gacaacgaactgaactttatctcgatgctgccgctgtccggctacgacggcaccctgcgc
taccgcggcggcctgcacgaagccggcgtcgacggcaaagtgtcggccaagaccggcgcg
ctgcagggcgtctacaacctggccggctttatcaccaccgccagcggccagcgcatggcc
ttcgtgcaatacctgtccggctacgccgtaccgccggaagatcagaagcagcgccgcgcg
ccgctggtgcgtttcgaaagccgcctgtatcgggatatttaccagaacaactga
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