Serratia entomophila: KHA73_03500
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Entry
KHA73_03500 CDS
T08209
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
senp
Serratia entomophila
Brite
KEGG Orthology (KO) [BR:
senp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
senp03009
]
KHA73_03500 (rlmD)
Enzymes [BR:
senp01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
KHA73_03500 (rlmD)
Ribosome biogenesis [BR:
senp03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
KHA73_03500 (rlmD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRAM
Methyltransf_31
Methyltransf_25
PCMT
TRM5-TYW2_MTfase
RrnaAD
MTS
Cons_hypoth95
Methyltransf_11
CMAS
PabTrmU54_TRAM_dom
Methyltransf_ANTKMT
FtsJ
DHDPS
NIR_SIR_ferr
Methyltransf_4
Methyltransf_23
Ribosomal_L22
DOT1
Motif
Other DBs
NCBI-ProteinID:
UIW19035
LinkDB
All DBs
Position
752282..753631
Genome browser
AA seq
449 aa
AA seq
DB search
MAQFYSPKRRVTTRQNLQMLTVTVNDLDPFGQGVARHDGKAIFVPGVLPGEQAEIQLTED
KRQFAKGKLKRLLTRSPQRVEPRCPHFGVCGGCQQQHADEALQQQSKAAALVRMIARETG
VTPQQEPVIAGPQYGYRRRARLGLSWQPKQQRLVMGFRQAASSELVPVRHCPVLCPELEQ
LLAPLNACLSALQGARRLGHAELVLADNGPVLVLRHLDALKEPDRQALLAFAQQKNVTIY
LAPDSDRLEKLCGETPYYQVDGLRLDFSPRDFIQVNDAVNQQMVAQALEWLEVQPNDRVL
DLFCGMGNFTLPLARRAAAVVGIEGVATLVANGQYNAHKNRLNNASFFHENLEDDVERQP
WAAQGFDKVMLDPARAGAAGVMSHIVKLAPERVVYVSCNPTTLARDSKVLLDAGYRLARV
RMLDMFPHTGHLESMALFINDTAPEVAAE
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaattctactctcccaaacgccgcgtgacgacccggcagaacttacaaatgtta
accgtgacggtgaatgacctcgatcccttcggccagggcgtggcgcgccatgacggcaag
gcgatattcgtgccgggagtgctgcccggcgaacaggcggaaatccagctgacggaagac
aagcgccagttcgccaaaggcaagctgaagcgcctgctgacccgcagcccgcagcgggtt
gagccgcgctgcccgcactttggcgtctgcggcggctgccagcagcagcacgcggacgag
gcgctgcagcagcagagcaaggcggcggcgctggtgcgcatgatagcccgcgaaaccggc
gttacgccgcagcaggagccggtgatcgccgggccgcagtatggctaccgccgccgcgcc
cgtctgggcctgagctggcagccgaagcaacagcggctggtgatggggtttcgccaggcg
gcctccagcgagctggtgccggtgcgccattgcccggtgctgtgtcccgagctggagcaa
ctgctggcgccgctgaacgcctgcctgagcgcgttgcagggcgcgcggcgtttgggccac
gcggaactggtgctggcggacaacggcccggtgttggtgttgcgccacctcgatgcgctg
aaagagccggatcgtcaggcgctgttggcgtttgcgcagcaaaaaaacgtaaccatttat
ttggcgccggacagcgatcggctggaaaaactgtgcggtgaaacgccgtattatcaggtc
gacgggctacgcttagacttcagcccgcgcgactttattcaggtcaatgacgcggtaaat
cagcaaatggtggcgcaggcccttgaatggctcgaggttcaacccaatgatcgggtattg
gatctgttctgcggcatgggcaattttactctgccgttggcgcgccgcgccgctgcggtg
gtgggcatagaaggtgttgccacactggtagcgaatgggcaatataatgcacataagaat
aggctgaataatgcttcgtttttccatgagaatctggaagacgacgttgagcggcaacct
tgggcagcacaaggatttgataaagtgatgctggatcccgcccgcgccggcgcggctgga
gtgatgtcacacattgtaaaactggcgccagagcgggtggtctatgtttcctgtaacccc
accacgctggcacgcgacagcaaagtgctgctggacgccggttatcgtcttgcgcgcgtg
cggatgttggatatgtttccgcacacggggcatcttgagtcaatggcgctgtttattaac
gacactgcgccagaggtcgctgcagagtag
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