Serratia entomophila: KHA73_06900
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Entry
KHA73_06900 CDS
T08209
Symbol
rhlE
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
senp
Serratia entomophila
Pathway
senp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
senp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KHA73_06900 (rhlE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
senp03019
]
KHA73_06900 (rhlE)
Enzymes [BR:
senp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
KHA73_06900 (rhlE)
Messenger RNA biogenesis [BR:
senp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
KHA73_06900 (rhlE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
HI1480
AAA_22
Shikimate_DH
UvrD-helicase
Cas3-like_C_2
DUF5693
Motif
Other DBs
NCBI-ProteinID:
UIW19663
LinkDB
All DBs
Position
1394328..1395680
Genome browser
AA seq
450 aa
AA seq
DB search
MSFETLGLSAEILRAVEEQGYREPTPIQRQAIPVVLEGRDLMASAQTGTGKTAGFTLPLL
QLLSKHDHPVKGRRPVRALILTPTRELAAQIGENVDAYSKHLRLRSLVVFGGVSINPQMM
KLRGGVDILVATPGRLLDLEHQNAVDLSKIEILVLDEADRMLDMGFIHDIRRVLAKLPAK
RQNLLFSATFSDEIKALANKLLHNPASVEVARRNTASEQIEQSVHFVDKKRKRELLSQMI
GEGDWKQVLVFNRTKHGANHLAEQLNKDGITAAAIHGNKSQGARTRALADFKDGKIRVLV
ATDIAARGLDIDQLPHVVNYELPNVPEDYVHRIGRTGRAERTGEAISLVCVDEHKLLRDI
ERLLKREIPRIALPGYEPDPSIKAEPIINGRQGGGRGAPRGNGGGQRSGNGGGNGGQREN
RGNGNARPQGEGQRRSGAPSRRPRSRKPTE
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgtcatttgaaaccctcggcttaagtgctgaaattctgcgcgctgttgaagaacagggc
tatcgcgaacctacgccaattcagcgtcaggctattcctgtcgtgttggaaggtcgtgac
ctgatggccagcgcccagaccggtaccggtaaaaccgctggctttaccctgccgctgttg
cagctgctgagcaagcatgaccatccggtcaaaggccgccgcccggtgcgcgcgctgatc
ctgacgccaacccgcgagctggcggcgcagatcggcgaaaacgtcgacgcctacagcaaa
cacctgcgcctgcgttcgctggtggtatttggcggcgtgagcatcaacccgcagatgatg
aagctgcgcggcggcgtcgacattctggtggcaacgccgggccgcctgctggatctggaa
caccagaacgcggttgatctgtccaaaattgaaattctggtgctggacgaagcggaccgc
atgctggatatgggctttatccatgatatccgtcgcgtgctggccaagctgcccgccaag
cgtcagaacctgctgttctccgccaccttctctgatgagatcaaagcgctggccaacaag
ctgctgcacaacccggcatcggttgaagtggcgcgccgcaacaccgcgtccgagcagatc
gaacaaagcgtgcacttcgtcgacaagaagcgtaagcgggaactgctgtcgcagatgatc
ggcgaaggcgactggaagcaggtgctggtgttcaaccgcaccaagcacggcgccaaccat
ttggccgagcagctgaacaaagacggcatcaccgcggcggcgatccacggcaataaaagc
cagggcgcccgcacccgtgcgctggccgattttaaagacggcaaaattcgcgtgctggtg
gcgaccgacatcgcggcgcgcggtctggacatcgaccagctgccgcacgtagtgaactac
gagttgcctaacgtgccggaagactacgtgcaccgcatcggccgtaccggccgtgcggaa
cgcaccggcgaggctatctcgctggtatgcgtggatgaacacaaactgctgcgcgatatc
gagcgtctgctgaagcgtgaaatcccgcgcattgccctgccgggctatgagccggatcca
agcatcaaggcggagccgatcatcaacggccgtcagggtggcgggcgcggtgcgccgcgc
ggtaacggcggcggtcaacgcagcggtaacggcggcggcaacggcggccagcgtgaaaac
cgcggcaacggcaacgcccgtccgcagggcgaaggccaacgccgttcgggcgcgccttcg
cgccgcccgcgcagtcgcaaaccgaccgaataa
DBGET
integrated database retrieval system
