Serratia entomophila: KHA73_18940
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Entry
KHA73_18940 CDS
T08209
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
senp
Serratia entomophila
Pathway
senp03030
DNA replication
senp03430
Mismatch repair
senp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
senp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KHA73_18940 (dnaE)
03430 Mismatch repair
KHA73_18940 (dnaE)
03440 Homologous recombination
KHA73_18940 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
senp03032
]
KHA73_18940 (dnaE)
03400 DNA repair and recombination proteins [BR:
senp03400
]
KHA73_18940 (dnaE)
Enzymes [BR:
senp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KHA73_18940 (dnaE)
DNA replication proteins [BR:
senp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KHA73_18940 (dnaE)
DNA repair and recombination proteins [BR:
senp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KHA73_18940 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
DNA_pol_IIIA_C
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
UIW17480
LinkDB
All DBs
Position
complement(3899279..3902767)
Genome browser
AA seq
1162 aa
AA seq
DB search
MAEPRFIHLRVHSDYSMIDGLAKIGPLVKRAAALAMPALAITDFTNLCGLVKFYGSAHGA
GIKPIIGADFHVQSEVLGDELAQLTVLATNNEGYQNLTLLISRAYQRGYGAAGPIIDRDW
LIEHREGLLLLSGARHGDVGKFLLRGNQPQVEQCLEFYQQYFPDSYYLELIRTGRQDEEN
YLHAAVALATERGLPVVATNDVRFLVEDDFDAHEIRVAIHDGFTLDDPKRPRNYSPQQYM
RSEDEMCELFADIPEALLNSVEIAKRCNVTIRLGEYFLPQFPTGDMTTEDFLVLKSKEGL
EERLEFLFPDPEVRAQRRPEYDERLDVELRVINQMGFPGYFLIVMEFIQWSKDNNVPVGP
GRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMEKRDLVIEHVAE
MYGREAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLVPPDPGMTLEKAFAAEPQ
LPEIYEADEEVKALIDMARKLEGVTRNAGKHAGGVVIAPTKITDFAPLYCDAEGHHPVTQ
FDKNDVEYAGLVKFDFLGLRTLTIIDWALEMINARRAKSGEPPIDIAAIPLDDKKSFDML
QRSETTAVFQLESRGMKDLIKRLKPDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGREE
ISYPDIQWQHESLKPVLEPTYGIILYQEQVMQIAQVLAGYTLGGADMLRRAMGKKNPVEM
AKQRGGFEDGAKSRGIDGELSVKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPA
EFMAAVMTADMDNTDKVVGLVDECWRMGLKILPPDINSGQYHFHVNDEGEIVYGIGAIKG
VGEGPIEAIIEARNSGEQGYFKDLFDLCARSDIKKLNRRILEKLIMSGAFDRLGPHRAAL
MNSLGDALKAADQHAKAEAIGQVDMFGVLAEAPEQVEQSYANVPRWQEQVVLDGERETLG
LYLTGHPITQYLKEIERYAGGQRLKDMHPTDRGKMTTAVGLVVAARVMVTKRGNRIGICT
LDDRSGRLEVMLFTEALEKYQHLLEKDRILIASGQVSFDDFSGGLKMMAREVMDISEARE
KYARGLAISLTDRQIDDQLLNRLRQSLEPHRSGTIPVHLYYQREDARAKLRFGATWRVTP
TDRLLIDLRTLVGNEQVELEFD
NT seq
3489 nt
NT seq
+upstream
nt +downstream
nt
atggccgaacctcgttttattcaccttcgcgttcacagtgactactccatgatcgatgga
ttggccaagattggacctttggtgaaaagagccgctgccttagccatgcccgctttggct
atcaccgacttcaccaacctgtgcggtctggtcaagttctacggcagcgcgcacggcgcc
gggatcaaaccgatcatcggcgcggattttcatgtgcaaagcgaggtgctgggcgatgag
ctggcgcagctcacggtgctggcgaccaacaacgaaggctaccagaacctgacgctgctg
atttcccgcgcctaccagcgcggctacggcgccgccggtccgattatcgatcgcgactgg
ctgatcgaacaccgcgaagggctgctgctgctgtccggcgcacgccacggcgacgtcggc
aagtttctgctgcgcggcaaccagccgcaggtggagcagtgcctggagttctaccagcag
tatttccccgacagttactacctggaactgatccgcaccggccggcaggacgaagaaaac
tatctgcacgccgccgtggcgttagccaccgagcgcggtttgccggtggtggccaccaac
gacgtgcgtttcctggtggaagacgactttgacgcccatgaaatccgcgtcgccatccac
gacggctttacgctggacgatcccaaacgcccgcgcaactacagcccgcagcaatatatg
cgcagcgaagacgaaatgtgcgagctgttcgccgacattccggaagcgctgctcaacagc
gtagagatcgccaagcgctgcaacgtgaccattcgcctgggcgaatacttcctgccgcag
ttcccgaccggcgatatgaccaccgaggatttcctggtgctcaagtcgaaggaagggctg
gaagagcgtctcgagttcctgttccccgatcctgaagtgcgcgcccagcgccgcccggaa
tacgacgagcgtctggacgtcgagctgagggtgatcaaccagatgggcttccccggttac
ttcctgatcgtgatggagttcatccagtggtcgaaggacaacaacgtgccggttggcccg
ggccgcggctccggcgccggttcgctggtggcctatgcgctgaaaatcaccgacctcgat
ccgttggagtttgacctgctgttcgaacgcttcctgaacccggaacgtgtctcgatgccc
gacttcgacgtcgacttctgcatggaaaagcgcgatctggtgatcgagcacgtggcggag
atgtacgggcgtgaagcggtttcgcagatcatcaccttcggcaccatggcggcgaaagcg
gttatccgcgacgtgggccgcgtgctgggccacccttatggctttgtcgaccgcatatcc
aagctggtgccacccgatccgggcatgacgctggaaaaggcctttgccgccgaaccgcag
ctgccggagatttacgaggccgacgaagaggtcaaggcgctgatcgacatggcgcgcaag
ctggaaggggtgacgcgcaacgccggtaaacacgccgggggcgtggtgatcgcgccgacc
aagataaccgactttgcgccgctgtactgcgacgccgaaggccaccacccggtcacccag
ttcgacaagaacgacgtggaatacgccggcctggtgaagttcgacttccttggcctgcgt
accctgaccatcatcgattgggcgctggagatgatcaacgcccgccgcgccaagagcggc
gagccgccgatcgacatcgccgccatcccgctcgatgacaagaaaagcttcgacatgctg
cagcgctcggaaaccaccgcggtgttccagcttgaatcgcgcggcatgaaagacctgatc
aaacgcctgaagcccgactgcttcgaagacatgatcgcactggtggcgctgttccgcccc
ggcccgctgcagtccggcatggtggataacttcatcgaccgcaagcacgggcgcgaagag
atttcctacccggatatccaatggcagcacgagtcgctcaaaccggtgctggaaccgact
tacggcatcatcctgtaccaggaacaggtgatgcagatagcccaggtgctggccggctat
acgctgggcggcgcggacatgctgcgccgcgccatgggcaagaagaacccggtcgagatg
gccaagcagcgcggcggctttgaagacggtgcgaaatcgcgcggcatcgacggcgagctg
tcggtcaaaatcttcgacctggtggagaaattcgccggttacggcttcaacaaatcgcac
tccgccgcctatgcgctggtgtcgtaccagacgctgtggctgaaggcgcactacccggcc
gagtttatggcggcggtaatgaccgccgatatggacaacaccgataaagtggtggggttg
gtggacgaatgctggcgcatggggctgaaaatcctgccgccggacatcaacagcgggcag
tatcacttccacgttaacgacgaaggcgaaatcgtctacggcatcggcgccatcaagggc
gtgggtgaggggccgatcgaagccatcatcgaagcgcgcaacagcggcgaacagggctat
ttcaaagacctgttcgacctgtgcgcgcgttccgacatcaagaaactgaaccgccgaatt
ctggaaaagctgatcatgtccggggcgttcgaccgccttggcccgcaccgcgccgcgctg
atgaactcattgggcgacgcgctgaaggcggccgatcagcacgccaaagccgaagctatc
ggccaggtggacatgtttggcgtactggcggaagcgccggagcaggtggagcaatcctac
gccaacgtgccgcggtggcaggagcaggtggtgctggacggcgagcgggagacgctgggg
ttatacctcaccggccacccgatcacccagtacctgaaggaaatcgaacgctacgccggt
ggccagcgtttgaaagacatgcatccgacggatcggggcaagatgactaccgccgtcggg
ctggtggtcgccgcgcgggtgatggtgaccaagcgcggcaaccgcatcggcatttgcacg
ctggacgaccgttccggccgtctggaggtgatgttattcaccgaagcgttagaaaaatac
cagcatttgttggaaaaagaccgtatcctgatcgccagtggacaggtcagctttgatgac
tttagcggcgggcttaaaatgatggcccgcgaggtaatggacatcagtgaagcccgtgaa
aaatacgctcgcgggcttgctatctcgctgacggacaggcaaattgatgaccagcttttg
aaccgtctccgccagtcgttggaaccccatcgctcggggacgattccagtgcatctctac
taccaacgggaagatgcgcgagccaagctgcgttttggcgcaacctggcgcgtaacgccc
accgatcgcttgttgatagacttgcggacgttggtaggcaatgagcaggtggaactggaa
tttgactaa
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