Serratia entomophila: KHA73_19155
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Entry
KHA73_19155 CDS
T08209
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
senp
Serratia entomophila
Pathway
senp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
senp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
KHA73_19155 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
senp03400
]
KHA73_19155 (recD)
Enzymes [BR:
senp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
KHA73_19155 (recD)
DNA repair and recombination proteins [BR:
senp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
KHA73_19155 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
RecD_N
AAA_30
UvrD_C_2
Viral_helicase1
NAT10_TcmA_helicase
AAA_11
SH3_13
AAA_22
UvrD-helicase
PhoH
SLFN-g3_helicase
nSTAND3
CbiA
UvrD_C
AAA_28
T2SSE
SRP54
AAA
TrwB_AAD_bind
NTPase_1
ATPase
AAA_16
Motif
Other DBs
NCBI-ProteinID:
UIW17520
LinkDB
All DBs
Position
complement(3949855..3951705)
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AA seq
616 aa
AA seq
DB search
MIALLEQAVALGALRPLDVQFARVVASEDEPDILLAAACLSAEAGAGHVCLMLDQLQADQ
LFEGRQPELAQAVWLAAGQPDLARWRQRLAASAAVGDGSGATPLVLQDQRLYLQRMWQNE
GEVAAFISGDSRHQAIEETQLRAILDQLFGAAAPEPDWQKIAAAVAATRRISVISGGPGT
GKTTTVAKLLAALVQLGEGERLRIQLAAPTGKAAARLTESLGSASRKLPLTPAQQALFPT
EAATLHRLLGAQPNSQRMRYHRGNPLHLDVLVVDEASMVDLPMMARLIAALPEQARVIFL
GDRDQLASVEAGAVLGDICRFAEQGYSAARAAELTRLTGCQLQGQQAPAQAAVRDSLCLL
RRSYRFDANSGIGQLAQAVNAGDGERARAAIGGRFSDVAGYPLATAEEYQALLDMCVAGY
RDYLKRVAEGADAVEVLAAFGHFQVLCALREGPFGVAGLNERIEAGLQRAGLIQRPPAAL
GRWYQGRPVMIGRNDSALGLFNGDIGIALRDESGELRVHFQLPDGSIKSVQPSRLPAHET
AYAMTVHKSQGSEFEHTVLVLPNHFLPVLTRELVYTAITRARSRLSLYASDGVLMKAIRT
PTQRRSGLAERLQQAE
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgatcgcgctgctggagcaggcggtggcgcttggcgcgctgcggccgctggacgtgcag
ttcgcccgcgtggtggcgagcgaggacgaacccgatatcctgctggccgccgcctgcctg
agcgcagaggcgggggccgggcacgtttgcctgatgctggatcagctgcaggcggatcaa
ctctttgaagggcgtcagccggagctggcgcaggccgtttggctggcggccgggcagccg
gatcttgcccgctggcggcagcgcctggcggccagcgcggcggtcggcgacggcagcggc
gctaccccgttggtgttgcaggatcagcgtctgtatctgcagcgcatgtggcagaacgaa
ggcgaggtggcggcgtttatcagcggcgacagccggcatcaggcgatagaagaaactcaa
ctgcgcgcgattcttgaccagctgtttggcgcggcggcgccagagccggactggcagaaa
atcgccgcggcggtggcggccacccggcgcatatcggtgatttccggcgggccgggcacc
ggcaagaccactaccgtcgctaagctgctggcggcgctggtgcagcttggggaaggcgaa
cgcctgcgcattcagttggctgccccgaccggcaaggcggcggcgcgcctgaccgaatcg
ctgggcagcgccagccgaaaactgccgttaaccccggcgcagcaggcgctgttcccgacg
gaggcggcgacgctgcaccggttgctgggcgcacagccgaacagccagcgcatgcgctat
catcgcggcaatccgctgcatttggatgtgctggtggtggatgaggcgtcgatggtcgat
ttgccgatgatggcgcgcctgattgccgccttgccggaacaggcgcgggtgattttcctc
ggcgaccgcgatcagctggcctcggtggaggccggtgcggtgctgggcgatatctgccgt
ttcgccgaacaggggtacagcgccgcgcgcgccgcggagctaacccggttgaccggctgc
cagctacaggggcagcaggctccggcgcaggcggcggtgcgcgacagcctgtgcctgctg
cgcagaagctaccgttttgacgccaattccggcattggccagctggcgcaggcggttaac
gccggtgatggcgagcgggcgcgggcggcgatcggcggccgtttcagcgatgttgccggt
tatccgctggcgaccgccgaagaatatcaggcgttgctggacatgtgcgtggcgggctat
cgcgattatctgaagcgggtggccgagggagccgatgcggtggaggtgctggcggcgttt
ggccattttcaggtgctgtgcgcgctgcgcgaagggccatttggcgtagccgggctgaac
gaacgcatcgaggcagggctgcagcgcgccgggctgattcagcgcccgccggcggcgtta
gggcgctggtatcaggggcggccggtgatgattgggcgcaacgacagcgcgctggggtta
tttaacggtgatatcggcatcgctctgcgcgatgagagcggcgaactgcgcgtgcatttt
caattgccagacggcagcatcaagtcggtgcagcccagccgcctgccggcgcatgaaacc
gcctacgcgatgacggtgcacaaatcgcagggttcggagtttgagcacacggtgctggtg
ctgcccaatcatttcctgccggtgctgacccgtgagctggtgtataccgccattacccgc
gcacgcagccggctctcgctgtatgccagcgacggggtgctgatgaaggcgatccgcacg
ccgactcagcgccgcagtgggttggccgagcgcctgcaacaggcggaataa
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