Serratia entomophila: KHA73_20020
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Entry
KHA73_20020 CDS
T08209
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
senp
Serratia entomophila
Brite
KEGG Orthology (KO) [BR:
senp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
senp03016
]
KHA73_20020 (thpR)
Enzymes [BR:
senp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
KHA73_20020 (thpR)
Transfer RNA biogenesis [BR:
senp03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
KHA73_20020 (thpR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
UIW17682
LinkDB
All DBs
Position
4143378..4143920
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AA seq
180 aa
AA seq
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MSSSRRLFFALPLPDALQQQVIRWRADAFSPEAGRPVAAANLHLTLAFLGEVSAQKEQAL
ARLADRIAQPGFSLRLDDLGHWPRPGVVWLGTRRAPRGLLQLAELLRSQAARSGCYQSPM
PFHPHITLLRAATQPVAIPPTTPGWAFNAETFALYQSVFENGRTRYHQLEQWPLAPQENR
NT seq
543 nt
NT seq
+upstream
nt +downstream
nt
atgtccagttcgcgccgcctgtttttcgctttgcccttgcctgatgcgctgcagcagcag
gtgatccgctggcgcgccgacgccttttcaccggaggcggggcggccggtggcggcggcc
aacctgcacctgacgctggcgttcctcggtgaggtcagcgcccagaaagagcaggcgctg
gcccggctggctgaccgcatcgcccaacccgggttcagcctgcggcttgacgatctcggc
cactggccgcgccccggcgtggtgtggctcggcacccgccgcgcaccgcgcgggctgctg
cagctggccgagctgctgcgctcgcaggccgcccgcagcggttgctaccaaagccccatg
ccgtttcacccgcacatcacgttgctgcgcgccgccacccaaccggtggcgatcccgccg
acaacgccgggttgggccttcaatgccgagaccttcgccttatatcagtcggtatttgaa
aacggccgcacccgttaccatcagctcgaacaatggcccctggcccctcaggaaaaccga
tga
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