Serratia entomophila: KHA73_21120
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Entry
KHA73_21120 CDS
T08209
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
senp
Serratia entomophila
Pathway
senp02020
Two-component system
senp02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
senp00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
KHA73_21120 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
KHA73_21120 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
senp03021
]
KHA73_21120 (rpoN)
Transcription machinery [BR:
senp03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
KHA73_21120 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
Motif
Other DBs
NCBI-ProteinID:
UIW17892
LinkDB
All DBs
Position
4400517..4401950
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AA seq
477 aa
AA seq
DB search
MKQGLQLRLSQQLAMTPQLQQAIRLLQLSTLELQQEIQLALESNPLLEQTDLHEEIDAKE
STETEGLDTREALEQKDMPEELPLDATWDEIYTAGTPSGTGTDYSDDELPVYQGETTQTL
QDYLMWQVDLTPFSDTDAAIATSIVDAVDDTGYLTVPLEDILESLGDENVTMDEVEAVLK
RVQHFDPIGVAARDLRDCLLVQLSQYAKDTPYLAEARLIISEHLDLLANHDFRSLMRSTR
LKEDTLKEAMVLIQSLDPRPGQSINTGESEYVIPDVLVRKVQDKWTVELNADSIPRLKIN
QQYAALGNSARNEADGQFIRSNLQEAKWLIKSLESRNETLLKVTRCIVSQQQAFFEQGEE
FMKPMVLADIAQAVEMHESTISRVTTQKFLHSPRGIFELKYFFSSHVNTDSGGEASSTAI
RALVKKLIAAENPAKPLSDSKLATLLSDQGIIVARRTVAKYRESLSIPPSNQRKQLV
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaaggtttgcaactcaggctcagccaacagctggccatgactccgcagctccag
caggccattcgcctgctgcagttgtccacgcttgagcttcagcaagaaatacagctggcg
ttagagagcaaccccctgcttgagcagaccgatctgcacgaagaaatcgacgccaaagag
tctaccgagaccgaaggcctggatacccgcgaggcgctggagcagaaggacatgcccgaa
gagctgccgctggacgccacctgggacgaaatctacaccgccggcaccccgtcgggcacc
ggcaccgactacagcgatgacgagctgccggtgtatcagggcgaaaccactcagacgctg
caggattacctgatgtggcaagtggatctgacgccgttctccgacaccgacgccgccatc
gccacctcaatcgtcgacgcggtcgacgacaccggctacctcaccgtgccgctggaagac
attctggagagcctgggtgacgagaatgtgaccatggacgaggtcgaggcggtattgaaa
cgcgtgcagcattttgatccgatcggcgtcgccgcgcgcgatctgcgcgactgcctgttg
gtccagctttcccaatacgcgaaagacacgccgtacctggccgaagcccgcctgatcatc
agcgaacacctggacctgctggccaatcacgactttcgcagcctgatgcgttcaacccgg
ctaaaagaagatacactgaaagaagcgatggtgctgatccagtcgctcgacccgcgcccg
gggcagtcgatcaataccggcgagtcggaatacgtcattccggacgtcctggtgcgcaag
gtgcaggataaatggacggttgagctcaacgccgacagcattccccgcctgaagatcaac
cagcagtacgccgcgttgggcaacagcgcgcgcaacgaagccgacggccagtttatccgc
agcaacctgcaggaagccaagtggctgattaaaagtctggaaagccgtaacgagaccctg
ttgaaagtgacccgctgcatcgtcagccagcagcaggcgttctttgagcagggtgaggaa
tttatgaagcccatggtgctggcggatatcgcccaggccgtggagatgcatgaatcgacg
atttcgcgcgtgaccacgcagaagtttctgcacagcccgcgcggcattttcgaattgaag
tatttcttctccagccacgtgaataccgacagcggcggcgaagcctcttcaacggcgatc
cgcgcattggtgaagaaattgattgcggcggaaaaccccgccaaaccgctcagcgacagc
aagctggccaccctgctctccgatcaggggatcatcgtggcgcggcgcaccgtcgccaag
taccgagagtctttgtccatcccgccgtcgaaccagcgtaaacagttggtttga
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