Serratia entomophila: KHA73_22410
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Entry
KHA73_22410 CDS
T08209
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
senp
Serratia entomophila
Pathway
senp00300
Lysine biosynthesis
senp00470
D-Amino acid metabolism
senp01100
Metabolic pathways
senp01110
Biosynthesis of secondary metabolites
senp01120
Microbial metabolism in diverse environments
senp01230
Biosynthesis of amino acids
Module
senp_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
senp00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
KHA73_22410 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
KHA73_22410 (dapF)
Enzymes [BR:
senp01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
KHA73_22410 (dapF)
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
UIW18123
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All DBs
Position
complement(4675565..4676389)
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AA seq
274 aa
AA seq
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MQFSKMHGLGNDFMVVDAVTQNVYFSPELIRRLSDRHLGVGFDQLLVVEPPYDPELDFHY
RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTQTGRMVLSVTDDDLVCVNMGE
PNFDPQAVPFRATKAEKTYIMRAAEHTVLCGVVSMGNPHCVLQVDDVKTAKVELLGPVLE
GHERFPERANIGFMQIVSREHIKLRVYERGAGETQACGSGACAAVAVGIQQELLSEEVHV
ELPGGSLHIRWKGPGSPLFMTGPATHVYDGFIHL
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgcagttctccaaaatgcacggtctgggcaacgactttatggtggtcgatgccgttaca
cagaatgtctatttttcacctgagctgatccgcaggctgtccgatcggcacctgggcgtc
ggctttgaccaactgttggtggtagaaccgccttacgatcccgagttggatttccactat
cgcatctttaacgccgacggcagcgaggtggcgcagtgcggcaatggcgcgcgctgtttt
gcccgctttgtgcggttgaaagggctgaccaacaagcgggatattcgcgtcagcacccag
accgggcgtatggtgctcagcgtcaccgacgatgacctggtgtgcgtcaatatgggtgag
ccgaatttcgatccgcaggcggtgccgtttcgcgccaccaaggcggagaagacttacatc
atgcgcgcggcggaacataccgtactgtgcggcgtggtatcgatgggcaacccgcattgt
gttttacaggtagatgatgtaaaaaccgccaaggtagagctgctcgggccggtgctggaa
gggcacgagcgcttcccggagcgggccaacatcggctttatgcaaatcgtcagccgcgaa
cacatcaagctgcgcgtctatgagcgcggcgccggcgagacgcaggcctgcggcagcggc
gcctgtgcggcggtggcggtgggcattcaacaggaattgctgtcagaagaggtgcatgta
gaactgccgggcggcagcctgcatattcgctggaaagggccgggcagcccgctgtttatg
accggtccggcaacccatgtatatgacggatttattcacctatga
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