Salmonella enterica subsp. enterica serovar Enteritidis EC20090531: AU40_16225
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Entry
AU40_16225 CDS
T03761
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
senq
Salmonella enterica subsp. enterica serovar Enteritidis EC20090531
Pathway
senq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
senq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AU40_16225 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
senq03400
]
AU40_16225 (recB)
Enzymes [BR:
senq01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
AU40_16225 (recB)
DNA repair and recombination proteins [BR:
senq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AU40_16225 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_11
AAA_25
Motif
Other DBs
NCBI-ProteinID:
AHR20401
LinkDB
All DBs
Position
complement(3034791..3038336)
Genome browser
AA seq
1181 aa
AA seq
DB search
MNDVAETLDPLRLPLTGERLIEASAGTGKTFTIAALYLRLLLGLGGSTAFPRPLTVEELL
VVTFTEAATEELRGRIRSNIHELRIACLRESTDNPLYARLLEEISDKKQAAQWLLLAERQ
MDEAAVFTIHGFCQRMLSLNAFESGMLFEQQLIEDESLLRYQACADFWRRHCYPLPRDIA
QVVFDVWKGPKALLKDIDRYLQGEAPVIKAPPSQEETLASRHEQILARINQVKQQWCEAV
SELDALIESSGIDRRKFNRGNQAKWIEKITAWAQEETKNYQLPEALGKFSQRFLAERTKA
GGVTPQHPLFVAIDNLLGEPLSIKDLVLTRALSEIRETVAQEKRRRGELGFDDMLSRLDT
ALRSESGEALAAAIRTRFPVAMIDEFQDTDPQQYRIFRRIWRHQPDTALLLIGDPKQAIY
AFRGADIFTYMKARSEVSAHYTLDTNWRSAPGMVNSVNKLFSQMNDAFMFRDIPFSPVKF
APRNQSLQFKVNDAPQPAMTLWLMEGESCGSGDYQSYMAQVCATQIRDWLRAGQTGDALL
TNGDSSRPVRASDISVLVRSRREAALIRDALTLLAIPSVYLSNRDSVFETLEAQEMLWVL
QAVMAPERENTLRSALATSMMGLTALDIETLNNDENAWDAVVEEFDGYRQIWHKRGVMPM
LRALMSARNIAENLLATAGGERRLTDILHISELLQEAGSQLESEHALVRWLAQHILEPDS
NASSQQLRLESDKHLVQIVTIHKSKGLEYPLVWLPFITHFRVQDQAFYHDRHSYEAVLDL
SHAEESIALAEAERLAEDLRLLYVALTRAVWHCSLGVAPLVRRRSDKKGETDVHQSALGR
LLQKGEPMDAAGLRACIEALCDEDIVCRTPGNTDNDRWQIAAASHAELSARTLQRLLYDS
WRVTSYSGLQQRGHSVAQDLIPRLDIDAAGVGEAAEAPAMTPHHFPRGASPGTFLHNLFE
ELDFTQPINPQWVQEKLELSGFETRWEPVLTRWLDTVLHVPLNETGVSLSVLTEREKQVE
MEFYLPIAQPLTAGELDALIRRYDPLSAGCPALDFMQVRGMLKGFIDLVFRYEGRYYLLD
YKSNWLGEDSAAYTQAAMATAMQAHRYDLQYQLYTLALHRYLRHRMANYDYERHFGGVIY
LFLRGVDSERPQQGIFTTRPAAALINQLDDMFAGEMSEEAQ
NT seq
3546 nt
NT seq
+upstream
nt +downstream
nt
atgaatgatgtcgccgagactcttgatcctctgcgcttgccccttacaggcgagcgtttg
attgaagcatcagcgggcacaggcaaaacgtttactatcgcggcgctgtatctgcggcta
ctgctcggtttaggcggcagcaccgcatttccccgtccgttgaccgttgaagaactgctg
gtggtaacctttacggaggccgccactgaagagctgcgtgggcgcatccgcagtaatatc
catgagttgcgcatcgcctgtctgcgggaaagcacggataatccgctgtatgcccgcttg
ctggaagaaattagcgacaaaaagcaggccgcgcagtggttattactggcagaacgacaa
atggacgaggccgcggtctttaccatccacggtttttgccagcgtatgctcagcctgaac
gctttcgaatccggtatgttgtttgagcaacagcttattgaagacgaatctttgttgcgt
tatcaggcctgcgccgatttctggcggcgtcattgctatccgctgccgcgcgacatcgcg
caggtggtgtttgacgtgtggaagggaccgaaggcgctcttaaaggatatcgatcgttat
ctgcagggcgaagcgccggtcattaaagcgccgccatcgcaggaggagacgctggcatcg
cgtcatgaacagatcctggcgcgcatcaaccaggtgaagcagcagtggtgtgaggcggtt
agcgagctggacgcgctgatcgaatcatccggcatcgatcgcagaaagttcaaccgcggc
aatcaggcgaaatggatcgaaaagatcaccgcgtgggcgcaagaagagacgaaaaactat
caattacccgaggcgttgggaaaattttcacagcgttttttagctgagcgcaccaaagct
ggcggcgtgacgccccagcacccattgtttgtcgccattgataacctgttgggcgaaccg
ctatcgattaaagatctggttcttacccgagcgctatcagagatccgtgaaacggtggct
caggaaaaacgccggcgcggcgagctggggtttgacgatatgctcagccgtttagatacc
gcgctgcgtagtgaaagcggcgaggcgctggctgcggcgattcgtacccgttttccggtg
gcgatgatcgatgaatttcaggataccgacccacaacagtaccgtatttttcgccgtatc
tggcgacatcaacccgatacggcgctattgctgattggcgatcctaaacaggcgatttat
gcgtttcgtggcgcggatatcttcacctacatgaaggctcgcagcgaagtgagcgcgcac
tatacgcttgacactaactggcgctccgcgccggggatggtgaatagcgttaacaagctg
ttcagtcagatgaacgacgcctttatgttccgcgatattcccttcagtccggtaaagttt
gcgcccagaaaccagtcgctgcaatttaaagtgaatgacgcgcctcaaccggcgatgacc
ctgtggctaatggagggggaaagctgcggttcgggcgattatcaaagttatatggcgcag
gtgtgcgccacgcaaattcgcgactggctgcgtgccgggcaaacgggcgacgcgctgctg
acgaacggcgattcgtcgcggcccgttcgtgcctcggatatcagcgtgttggtgcgcagc
aggcgggaagccgcgctgatacgggatgcgctgaccttactggcgatcccctccgtctat
ctttctaaccgcgacagcgtattcgaaacgctcgaagcgcaggagatgctgtgggtgttg
caggcggtgatggcgcccgaacgtgagaatacgctgcgtagcgctttggcgacatcaatg
atgggccttaccgcgctggatatcgaaacgcttaacaatgatgaaaatgcgtgggatgcg
gttgtcgaagagtttgatggctaccgacagatttggcataaacgcggcgtgatgcctatg
ctgcgcgcgctaatgtcggcgcgcaatattgctgaaaacctgctggcgacggcgggaggc
gaacgtcggctgacggatattttgcatattagcgagctgttacaggaagccggttcgcag
ctggaaagcgaacatgcgctggtgcgttggctggcgcagcatatccttgaacccgatagc
aatgcttccagccagcaactacgtctggaaagcgataagcatctggtgcaaatcgtcacc
attcataaatcgaaaggtctggaatacccgctggtctggttaccttttatcacccatttc
cgcgtgcaggaccaggctttttatcacgacaggcactcctacgaggcggtgctggacctt
agtcacgccgaagagagcatagcactggcggaagccgaacgcctggcggaagacctgcgc
ctactttatgtcgcgctgacccgtgcagtgtggcattgcagcctcggcgtcgcgccgctg
gtgcggcgtcgtagcgataagaaaggagagacggatgtgcaccaaagcgcgcttgggcga
ctcctgcaaaaaggcgaaccgatggatgccgcaggccttcgcgcctgtattgaggcgcta
tgcgacgaggatatcgtgtgtcgaacgccaggcaatacggataacgaccgctggcaaatt
gccgctgcatcgcacgcggaactcagtgccagaacgctgcaacgcctgctttatgatagc
tggcgcgtcaccagttattccggtttgcagcagcggggacatagcgtggcgcaagatctt
attcctcgtctcgacattgacgccgcaggcgttggcgaagcggcggaagcgccggcaatg
acgccgcatcactttcctcgcggggcatcgccgggaacatttttgcacaacctgtttgaa
gagcttgattttactcaaccgataaacccccaatgggtacaggaaaaactggagctgagt
ggttttgagacgcgatgggagcccgtacttacccgctggctggacaccgtgttgcacgtt
ccccttaacgagacgggcgttagtctgagcgtgctgaccgagcgtgaaaaacaggtcgaa
atggagttttatctgccgattgcccagccgcttaccgccggagagctggatgcgttgatt
cgtcgatacgacccgctttcagcaggttgccctgcgctggatttcatgcaggttcgcggc
atgttaaagggctttatcgacctggtttttcgttatgaggggcgctattacctgctcgac
tataaatctaactggctgggcgaggatagcgccgcttatacccaggcggcgatggctacg
gcgatgcaggcgcatcgctatgatttgcagtaccagctttatacgctggcattgcatcgt
taccttcgtcatcgcatggcgaattacgactatgaacgccatttcggcggcgtcatctat
ctctttttacgcggggtggatagcgaacgtccgcagcagggtatttttaccactcgccct
gcggcggcgttaattaaccaactggatgatatgtttgcaggtgaaatgagtgaggaggcg
caatga
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integrated database retrieval system
