KEGG   Salmonella enterica subsp. enterica serovar Typhimurium DT2: STMDT2_02811
Entry
STMDT2_02811      CDS       T02869                                 
Symbol
sciS
Name
(GenBank) probable IcmF-related integral membrane ATP-binding protein, virulence associated protein
  KO
K11891  type VI secretion system protein ImpL
Organism
senr  Salmonella enterica subsp. enterica serovar Typhimurium DT2
Pathway
senr03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:senr00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    STMDT2_02811 (sciS)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:senr02044]
    STMDT2_02811 (sciS)
Secretion system [BR:senr02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   STMDT2_02811 (sciS)
SSDB
Motif
Pfam: IcmF-related_N IcmF-related IcmF_C IcmF_helical
Other DBs
NCBI-ProteinID: CDG06438
LinkDB
Position
323835..327704
AA seq 1289 aa
MQKFLSLLFSRRALAVVGVLVLALLVWFVGPLVSFDTLRPLASVGSRVVTIALLLMLLVL
WLVNWSMSIIGISVLCLAIGFVTPLLALGDVHPFAPLWVRLTLIGFILLMYALYGLYRLW
RALRMDEQLLRRFLHPRGEEVPVAGEIKADLRTVNHIVTQAIRQLRQLRVDMPGWRKIFE
GKRFLYELPWFMVVGSPGDGKTTALLNTGLQFPLAEQMEQTSRILTVPGGGTLHCDWWFT
NEAVLIDTAGRYARHDDGGEASAAQRNAGEWQGFLGLLRKHRPGAPLNGVILTLNVADLT
AQSPAERLAACAALRARLAELRETLGIRFPVYLVVTKMDLLPGFSEYFRTLTSHLRAQIW
GFTLPYSRRRKAGDPQALHAACAQELARLTLRLDQGLDTRLQEEYDLKSRQRLYTFPREF
AALGEPLLEAIEQIFLDSKFDATQLNNTLRGVFFTSAAQAQADAVADQLSIWQRFVRAIK
TARGESSASLPHALPDGNRSYFLHDLLTQFIFREAHLVEPNLQWAWRYRLLRLGGHLLVL
VLAFLLWQGMQTSQQTNGDYLNEISARATRLDGDVKAYTGKPAMAPVPALLDSARELSAW
PELDPDAPPLAWRYGLYSVPPVTDSVASLYNRLLDQLLLPPLVKRMEYVLADAIARQDSK
AAYDALRIYLLLNLDKDHEDKYNAAEIQSWVINDLGNSDSVAGFGGRAAVLTHIEALFDG
SRVVHSPYEKDEALIRQARAFLDGHSSTERIYARALAAMESEAPQEFTLVRAVGADAGTV
FVRSNGAPLDRGVPGIFTREGYRELFDKRLPEFVAAATANDGWVMGRESTPKKLTDSLRS
QIPGQEQSVAREVRRLYLTEYARRWQDFLDSIHSINSAGEEGSSGLAYDLQVLRTLASPD
SPLMRLGKAVVEQTTLVPPPDPQARQKQLAQRASGNAGKVVQTAKLFQDIHPEERLEKTL
VDDRFAALREVIAGRTDGGQSGGGTMQIASLLTMLNEYYTQLTIADSALAAGTLPARITA
ADKLQLEAAKLPAPLKNILLDLTKQGTRKINAGTGDVLNTQMEAMMGDDCRDAIDGRYPF
ADSPQEVSAEDFNRIFASGGVLDAFWSKQLAPLADTASDPWRYKPTEGNMTLQGPDLTPF
QQAKQIRSVFFNSEGGKKFSWSMQISVVDMDPAITELVIDIDGQVLRYAHGPDRPLKVTW
PGPRNGSMAEITASPRIRQDTSTLLTGGPWALFHLLDAGMVQETAVRGRQLVEYDFDGRR
VVLEITAGRDFNPVSRELLQNFSCPARAL
NT seq 3870 nt   +upstreamnt  +downstreamnt
atgcaaaaatttcttagtctgcttttttcccggcgcgcgctggcagttgtgggcgttctg
gttctggcgctgctggtctggtttgtcgggccgctggtgtcatttgataccctgcgcccg
ctggcctccgtgggtagccgggtagtgaccattgccctgttgctgatgctgctggtactg
tggctggtcaactggtcgatgagtatcatcggcatcagtgtcctgtgcctggcgattggc
ttcgtcacaccgctgctggccctgggcgatgtccatccgtttgcgccgctgtgggtccgc
ctgaccctgattggtttcatcctgctgatgtacgcgctgtacggcctgtaccggctgtgg
cgtgcgctgcgtatggatgaacaactgctgcgtcgcttcctgcatccgcgcggggaagag
gtaccggtggcaggcgagatcaaagccgacctgcgcaccgtcaaccatattgtcacgcag
gccatccggcagctgcggcagttgcgggtggatatgcctggctggcgtaaaatcttcgag
ggaaaacgctttctgtatgagctgccgtggttcatggtggtcggcagtcccggcgacggc
aaaaccacggccctgctgaacaccggattgcagttcccgctggcggagcaaatggagcag
acttcgcgcatcctgacagtaccgggtggcggcacgctacactgcgactggtggtttacc
aacgaagcggtgttgattgataccgccggacgctacgcccgccacgatgacggtggtgaa
gcgagcgccgcgcagcgtaacgccggagagtggcagggctttctcggtctgctgcgtaaa
catcgccccggcgcgccgcttaacggcgtgatcctgacgctaaacgtggcggatttaacc
gcacagtcaccggcggaacgcctggcggcctgcgccgctctgcgggcgcgactggcagaa
ctgcgcgagaccctggggattcgctttccggtctatctggtggtcaccaaaatggatttg
ttgccggggttcagcgaatattttcgcacgctgaccagccatcttcgtgcacaaatctgg
ggcttcacgttgccgtacagccgcaggcgaaaagcgggcgacccgcaggcgctgcacgcc
gcctgcgcgcaggagctggcgcgcctgacgctgcggttggatcagggactggatacccgg
ttacaggaagagtacgaccttaaaagccgccagcggctgtataccttcccgcgtgagttc
gccgccctcggcgagccgttgctggaggctattgaacagatcttcctcgattcaaaattc
gatgccacgcaactgaataacacgctgcgcggggtgtttttcaccagcgccgcgcaggcg
caggccgacgccgtggccgaccagttgagtatctggcagcgctttgtccgggcgataaaa
accgcccgtggcgaatcctccgcctctctcccacacgctctgccggacggcaaccgcagc
tacttcctgcatgacctgctgacacagtttatttttcgtgaagcgcacctggtggagcca
aacctccagtgggcctggcgttaccgcctgctgcgcctcggcgggcacctgctggtactg
gtgctggcattcctgttgtggcaggggatgcagaccagccagcagaccaacggcgactat
ctgaatgaaatcagcgcccgcgcgacccggctggacggtgatgtgaaagcctacaccggt
aaaccggcgatggctcccgtcccggcactgctggacagcgcaagggaactgtccgcctgg
ccggaactggacccggacgcgccgccgctggcctggcgctacggtctgtacagcgtaccg
ccggtaaccgacagcgtggcgtcgctgtacaaccgtctgctggatcaactgctgctgccg
ccgctggtgaaacggatggagtatgtgctggcggacgccattgcccgtcaggatagtaaa
gcggcctacgatgccctgcgcatctatctgctactgaatctggataaagatcacgaagat
aaatacaacgcggcggagatccagtcgtgggtgattaacgatctggggaacagcgacagc
gtggccgggttcggcgggcgcgccgccgtgctgacgcatatcgaagcgctgtttgacggc
agccgggtggtgcattcaccgtatgagaaagatgaggcgctgatccgccaggcgcgggca
ttcctcgacggtcacagcagtaccgagcgtatctacgcgcgggcgctggcggcaatggag
agcgaagcgccgcaggagttcacgctggtacgcgccgtcggcgcggatgcgggaacggtc
tttgtgcgtagcaacggcgcgccgctggatcggggcgtgccgggtatttttacccgtgaa
ggataccgggagctgttcgacaaacgattaccggaatttgtggcggcggcgacggcgaac
gatggctgggtgatgggccgggagagtacgccaaaaaagctgactgacagcctgcgcagc
cagataccggggcaggagcagtctgtcgcccgcgaagtccgccgtttgtacctgacggaa
tatgcccgccgctggcaggattttctggacagtatccatagtatcaacagtgccggggaa
gagggcagttccggcctggcctatgatttacaggtgctgcgcaccctggcgtcgccggac
tcaccgctgatgcggctgggaaaagcggtggtggagcagaccacgctggtgccgccgccg
gacccgcaggccagacagaaacaactggcgcagcgcgcatccggtaacgcggggaaagtg
gtacagacggcaaaactgttccaggatattcacccggaagaacggctggaaaaaacgctg
gtggatgatcgtttcgccgcgctgcgcgaggtcattgccgggcggacggacggcggacag
agcggcggtgggacgatgcagatcgcttcgctgctgaccatgctcaacgagtattacacc
caactgaccattgctgatagcgcgctggcggcggggacgttgccagcgcgcattactgcc
gcagacaagttgcaactggaggcggcgaaactgcccgcgccgctgaaaaacatcctgctg
gatctgacgaagcagggaacgcgcaaaatcaacgccgggaccggcgacgtgctgaacacc
cagatggaggcgatgatgggcgacgactgccgtgacgccatcgacgggcgctatccgttc
gccgacagtccgcaggaggtcagcgccgaggactttaaccgcatcttcgccagcggcggc
gtactggatgctttctggagcaaacaactggctccgctggcggacaccgccagcgacccg
tggcgctacaaaccgaccgaaggcaacatgacattgcaggggccggatctgacgccgttt
cagcaggcgaagcagatccgcagcgtattttttaacagcgagggcgggaaaaaattttcc
tggtcgatgcagattagcgtggtggatatggacccggccatcacggaactggtgattgat
atcgacggccaggtgctgcgctacgcccatggtccggaccgtcccctgaaagtaacgtgg
ccgggaccgcgcaacggctcgatggcggaaatcaccgccagcccgcgtattcgccaggac
acctcaacgctactgaccggcgggccgtgggcgctgtttcatctgctggacgccggaatg
gtacaggaaacggcggtgcgggggcgtcaactggtggaatatgattttgacggtcgccgg
gtggtgctggaaatcaccgccgggcgggattttaacccggtcagccgggagctgttgcag
aacttcagttgcccggcgagggcgctgtaa

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