Salmonella enterica subsp. enterica serovar Typhimurium DT2: STMDT2_09311
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Entry
STMDT2_09311 CDS
T02869
Symbol
ycbB
Name
(GenBank) putative exported protein
KO
K21470
L,D-transpeptidase YcbB
Organism
senr
Salmonella enterica subsp. enterica serovar Typhimurium DT2
Brite
KEGG Orthology (KO) [BR:
senr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
senr01002
]
STMDT2_09311 (ycbB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
senr01011
]
STMDT2_09311 (ycbB)
Peptidases and inhibitors [BR:
senr01002
]
Cysteine peptidases
Family C82
STMDT2_09311 (ycbB)
Peptidoglycan biosynthesis and degradation proteins [BR:
senr01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
STMDT2_09311 (ycbB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
CDG07089
LinkDB
All DBs
Position
1042146..1043987
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AA seq
613 aa
AA seq
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MLLNKMCGRCLSAISLCLAVTFAPLFNAQADEPEMIPGDSAVAATDLAGPQKQSAATAIM
AGIQPLPEGVSAEKVRADLQSQLPSGYTPVYMSQLTLLYAARDMKPMWDNRDAVKAFQQQ
LAEVAIAGFQPQFTAWVALLTDPAVNGMARDVVLSDAMMGYLHFIANIPVKGQRWLYSNK
PYALATPPVSVINQWQIALEEGQLPMFVASLAPQPPQYAPMHDALLKLVADSRPWPQLTN
TATLRPGQWSNDVPALREILQRTGMLDGGPKIALPGDNTADSAVVSPSAVVDETSVAHDE
PTARRSKPAPAARAYDRELVEAVKRFQAWQGLGADGVIGPATRNWLNMTPAQRAGVLALN
IQRLRLLPAELSTGIMVNIPAYSLVYYQNGNQVLASRVIVGRPDRKTPMMSSALNNVVVN
PPWNVPPTLARKDILPKVWNDPGYLERHGYTVMRGWNSKEAIDPWQVDWATITPSNLPFR
FQQAPGAHNSLGRYKFNMPSSDAIYLHDTPNHTLFQRDARALSSGCVRVNKASELANMLL
QDAGWNDERISGALKQGDTRYVNIRQNIPVNLYYLTAFVGADGRMQYRTDIYNYDLTARS
SAQIVPKVEQLIR
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgttgcttaataagatgtgtggtcgttgtctgtcggcaatcagtttatgcctggccgta
acattcgctccactgttcaatgcgcaggccgatgagcctgaaatgatacctggcgatagc
gccgttgccgcgacggatctggctgggccgcagaagcaatcagccgcgacggcgattatg
gccgggattcagccgctgccggagggcgtttcagccgagaaagtccgggctgatttacag
tcgcagcttccttccggctatacgccggtctatatgagccagctgacattgctgtatgcc
gcgcgcgacatgaagcccatgtgggataatcgcgatgcggtgaaagccttccagcaacag
ttggcggaggtggcgattgccggattccagccgcagtttaccgcctgggtggcattgttg
accgatcccgccgtaaacggtatggcgcgcgatgttgtgttgtcagacgccatgatgggc
tatctccatttcattgcgaatatccccgtcaaaggccagcgctggttatatagcaacaaa
ccttacgcattggcgacgccgccagtctcggtgattaaccagtggcaaatcgcgctggaa
gagggccagttgccgatgtttgtcgccagcctggcgccgcagcccccacagtatgcgccc
atgcatgatgcgctgctgaagctggtggcggactctcgcccgtggccgcagttgaccaat
accgcgacgctgcgcccggggcaatggagtaacgatgtgcctgcgctgcgcgaaatatta
cagcgtacggggatgctggatggcggtccaaagatagccttacccggcgataacactgct
gatagcgccgtcgtcagcccctccgccgtggtcgacgaaacatcggtggcgcacgacgaa
ccaacggcccgccgtagtaagccggctccggcggcacgcgcctacgatcgtgaactggtc
gaggcggtaaagcgttttcaggcatggcaagggctgggggcggatggcgttattggcccg
gcgacgcgtaactggcttaatatgacccccgcgcaacgcgcaggcgtactggcactgaat
atccaacgtttacgcctgctgccagcggaactctctaccggtattatggtaaacattccc
gcttattcgctggtctactatcagaatggcaaccaggtgctggcttcaagggtgatcgtc
gggcgtcccgatcgtaaaacgccgatgatgagcagcgcgctgaataatgtggtggtgaac
ccgccgtggaacgttccgcccacgcttgcgcgtaaagacattttaccgaaggtgtggaat
gacccaggctatctggagcgccatggctacaccgtgatgcgcggctggaacagcaaagaa
gcgatcgatccgtggcaggttgactgggccaccattacgccatcgaatcttccgttccgt
ttccagcaggcgccaggcgcgcacaattcgctggggcgttataaatttaatatgccgagt
tcagatgcgatctatctgcacgatacgcctaaccatactctctttcagcgtgacgccagg
gcgttaagttccggctgcgtgcgggtcaataaggcctctgagctggcgaatatgctcttg
caggatgctggctggaacgatgagcggatctcaggcgccctgaagcaaggcgacacgcgg
tatgtcaatatccggcagaacattccagtaaatctttactatctgaccgcatttgtcggc
gcagatggacgtatgcaatatcgtacagatatttacaattacgatctcacagcgcgatcc
agcgcacaaattgtgccaaaggttgaacaattaatcaggtaa
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