Salmonella enterica subsp. enterica serovar Typhimurium DT2: STMDT2_18221
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Entry
STMDT2_18221 CDS
T02869
Symbol
ruvB
Name
(GenBank) Holliday junction DNA helicase ruvB.
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
senr
Salmonella enterica subsp. enterica serovar Typhimurium DT2
Pathway
senr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
senr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
STMDT2_18221 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
senr03400
]
STMDT2_18221 (ruvB)
Enzymes [BR:
senr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
STMDT2_18221 (ruvB)
DNA repair and recombination proteins [BR:
senr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
STMDT2_18221 (ruvB)
RecFOR pathway proteins
STMDT2_18221 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_22
Mg_chelatase
AAA_3
AAA_16
nSTAND3
AAA_14
Rad17
TIP49
AAA_2
AAA_18
RNA_helicase
AAA_17
NTPase_1
Bac_DnaA
AAA_28
AAA_24
ABC_tran
NB-ARC
TsaE
NPHP3_N
Sigma54_activ_2
Motif
Other DBs
NCBI-ProteinID:
CDG07980
LinkDB
All DBs
Position
complement(1938805..1939734)
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AA seq
309 aa
AA seq
DB search
MAEYVGQPQVRSQMEIFIQAAKRRGDALDHLLIFGPPGLGKTTLANIVANEMGVNLRTTS
GPVLEKAGDLAAMLTNLEPHDVLFIDEIHRLSPVVEEVLYPAMEDYQLDIMIGEGPAARS
IKIDLPPFTLIGATTRAGSLTSPLRDRFGIVQRLEFYQVPDLQHIVGRSARHMGLEMSDD
GALEVARRARGTPRIANRLLRRVRDFAEVKHDGAISAEIAAQALDMLNVDAEGFDYMDRK
LLLAVIDKFFGGPVGLDNLAAAIGEERETIEDVLEPYLIQQGFLQRTPRGRMATVRAWNH
FGITPPEMP
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
ttggcggaatatgtcggccaaccgcaggtgcgctcccagatggagatctttattcaggcg
gcaaaacggcgtggcgacgcactagatcacttgctgattttcggcccgccagggttaggt
aaaacgactctggcgaatatcgttgccaatgaaatgggcgtcaatctccgaaccacgtcc
ggcccggtgctggaaaaagcaggcgatctggcggctatgctcaccaatcttgaaccgcat
gatgtgctgtttattgatgagattcaccggctttcaccggtggtggaagaggtactctat
ccggcgatggaagattaccagttggatattatgattggcgaagggcctgccgcacgttca
attaagatcgatctgccgccgtttacgctcattggcgcgacgacgcgcgccgggtcgtta
acgtccccgctacgtgaccgttttggtattgtgcagcgcctggagttctaccaggtgccc
gatctgcagcacatcgttgggcgcagcgcaaggcacatggggcttgagatgagcgatgac
ggcgcgctggaagtggcgcgtcgggcgcgcggtacgccgcgtatagccaaccgtctgctc
agacgtgtgcgtgattttgctgaggtgaagcatgacggggctatttcagcggaaattgcc
gcgcaggcgctggatatgctgaacgtcgatgcggaagggtttgactatatggatcgcaag
ctgctgctggcggttattgataaattcttcggtggtccggtgggactggataacctggcg
gcggcgattggcgaagagcgtgaaaccattgaggatgtgctggagccgtatctgattcag
caaggctttttgcagcgtacgccgcgtgggcgtatggcaacggtgcgcgcctggaaccat
ttcgggatcacgccgccagagatgccttag
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