Salmonella enterica subsp. enterica serovar Typhimurium DT2: STMDT2_20351
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Entry
STMDT2_20351 CDS
T02869
Symbol
dacD
Name
(GenBank) penicillin-binding protein
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
senr
Salmonella enterica subsp. enterica serovar Typhimurium DT2
Pathway
senr00550
Peptidoglycan biosynthesis
senr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
senr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
STMDT2_20351 (dacD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
senr01002
]
STMDT2_20351 (dacD)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
senr01011
]
STMDT2_20351 (dacD)
Enzymes [BR:
senr01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
STMDT2_20351 (dacD)
Peptidases and inhibitors [BR:
senr01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
STMDT2_20351 (dacD)
Peptidoglycan biosynthesis and degradation proteins [BR:
senr01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
STMDT2_20351 (dacD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
PBP5_C
Beta-lactamase2
Beta-lactamase
CDPS
Motif
Other DBs
NCBI-ProteinID:
CDG08193
LinkDB
All DBs
Position
complement(2125922..2127094)
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AA seq
390 aa
AA seq
DB search
MLLKRRLFIAASLFAMHLSPALAADAVSFAPQPPAIDAGAWVLMDYTTGQVLTAGNEHQQ
RNPASLTKLMTGYVVDRAIDSHRISPDDIVTVGRDAWAKDNPVFVGSSLMFLKEGDRVSV
RDLSRGLIVDSGNDACVALADYIAGGQPQFVAMMNSYVKKLNLQDTHFETVHGLDAPGQH
SSAYDLAVLSRAIIHGEPEFYHMYSEKSLTWNGITQQNRNGLLWDKTMHIDGLKTGHTSG
AGFNLIASAVDGQRRLIAVVMGAKSSKGREEQARKLLQWGQQNFATVQILHSGKKVGSER
IWYGDKEKIALGTEQDFWMALPKAEIPHIKAKYVLDRKELEAPIAAHQQVGEIELYDRDK
LIAQWPLVTLESVGKGGMFSRLSDYFQHKA
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgctgttgaaacgccgtttgtttattgccgcttctttattcgcgatgcacctttctcct
gcgcttgcggccgatgccgtaagttttgctccccaaccgccagccattgatgcaggcgcc
tgggtgttgatggattacactacgggacaggttcttaccgccggtaatgaacaccagcaa
cgtaatcccgccagccttaccaagctaatgacgggctacgtcgtcgatcgcgccatcgat
agtcatcgtatcagccctgacgatatcgtcacagttgggcgcgacgcctgggcgaaggat
aatccggtgtttgtcggctcctcgttgatgtttttaaaagaaggggatcgcgtgtcggtg
cgtgatttaagccgtggcttaatcgtggattccggtaacgatgcctgtgtggcgctggcg
gattatatcgcgggcgggcagccgcagtttgtggcgatgatgaacagctatgtgaaaaaa
ctcaatttacaggatacccattttgaaaccgtccacggtctggatgcgccgggacaacat
agctccgcgtatgacctggccgtactctcccgggcgattattcacggcgagcctgaattt
tatcacatgtacagcgagaaaagcctgacctggaacggcatcacgcagcagaaccgtaac
ggcttgttatgggataagaccatgcatatcgatgggcttaaaaccggacacacatcgggg
gcgggatttaatcttatcgcatcggcggtggacgggcagcgtcgacttatcgccgttgtg
atgggggcgaaaagttcgaaaggtcgtgaggaacaggcgcgaaaactgttgcagtggggc
cagcaaaactttgcgacggtgcagattttgcacagcggtaaaaaagtgggcagcgagcga
atctggtatggagacaaagaaaagattgcgctgggtacggaacaggacttctggatggcg
ctgcctaaagcggaaattccgcatatcaaagcaaaatatgtgctggatagaaaagagctg
gaggcgccaatcgccgctcatcaacaggtaggtgaaatagagctctacgatcgggataaa
ctgatcgctcagtggccgctggtcactctggaatcggtgggtaaaggcggtatgttctct
cgtctgagcgactattttcagcataaagcgtaa
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