Salmonella enterica subsp. enterica serovar Typhimurium DT2: STMDT2_20711
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Entry
STMDT2_20711 CDS
T02869
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
senr
Salmonella enterica subsp. enterica serovar Typhimurium DT2
Pathway
senr00521
Streptomycin biosynthesis
senr00523
Polyketide sugar unit biosynthesis
senr00525
Acarbose and validamycin biosynthesis
senr00541
Biosynthesis of various nucleotide sugars
senr01100
Metabolic pathways
senr01110
Biosynthesis of secondary metabolites
senr01250
Biosynthesis of nucleotide sugars
Module
senr_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
senr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
STMDT2_20711 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
STMDT2_20711 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
STMDT2_20711 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
STMDT2_20711 (rfbB)
00525 Acarbose and validamycin biosynthesis
STMDT2_20711 (rfbB)
Enzymes [BR:
senr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
STMDT2_20711 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
Polysacc_synt_2
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
adh_short
KR
Gp_dh_N
Sacchrp_dh_NADP
Motif
Other DBs
NCBI-ProteinID:
CDG08229
LinkDB
All DBs
Position
complement(2167392..2168477)
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AA seq
361 aa
AA seq
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MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADIC
DSAEITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGE
DKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPSSPYSASKASSDHLVRA
WRRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDHA
RALHMVVTEGKAGETYNIGGHNEKKNLDVVFTICDLLDEIVPKATSYREQITYVADRPGH
DRRYAIDAGKISRELGWKPLETFESGIRKTVEWYLANTQWVNNVKSGAYQSWIEQNYEGR
Q
NT seq
1086 nt
NT seq
+upstream
nt +downstream
nt
gtgaagatacttattactggcggggcaggttttattggatcagctgttgtccgccatatt
attaagaatacacaggacactgtagttaatattgataaattaacctacgccggtaatctt
gaatccctttctgatatttctgaaagtaatcgctacaattttgaacacgcggatatttgt
gattccgctgaaataacgcgtatttttgagcagtaccagccggacgcggtgatgcatttg
gctgcggaaagtcatgtggaccgttcgattaccgggccagcagcatttattgaaaccaat
atcgtcggcacctatgcacttcttgaagttgcgcgtaaatactggtctgcccttggcgaa
gataaaaaaaataattttcgttttcatcatatttccactgatgaagtttacggcgattta
ccgcatcctgatgaagttgaaaacagcgttacgctgccgttatttactgaaacgacggca
tatgcgccaagtagcccctattctgcgtcaaaagcatccagcgatcatttagtccgtgcc
tggcggcgtacctatggtctaccaacgatcgttaccaattgttctaataactatggccct
tatcacttccctgaaaaactgattccgttggtcattttgaacgcactggaaggaaagcct
ttgccaatttatggcaaaggggatcagattcgcgattggctatatgtagaagatcatgct
cgcgcgcttcatatggtagtgactgaaggcaaggcaggggagacttataacattggtgga
cacaatgagaagaaaaatctcgatgtggtatttaccatctgtgatctgctggatgagatt
gtacccaaagcgacttcttatcgtgaacaaatcacttatgtcgcggatcgtccgggccat
gatcgtcgttatgccattgatgcaggtaaaattagccgcgaattaggctggaaaccgctg
gagacctttgaaagcggtattcgtaaaacagtggaatggtaccttgcaaatactcaatgg
gtaaacaatgttaaaagtggggcgtatcagagttggatagaacagaactatgaaggacgc
cagtaa
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