Salmonella enterica subsp. enterica serovar Typhimurium DT2: STMDT2_21991
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Entry
STMDT2_21991 CDS
T02869
Symbol
yejD
Name
(GenBank) ribosomal small subunit pseudouridine synthase
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
senr
Salmonella enterica subsp. enterica serovar Typhimurium DT2
Brite
KEGG Orthology (KO) [BR:
senr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
senr03009
]
STMDT2_21991 (yejD)
Enzymes [BR:
senr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
STMDT2_21991 (yejD)
Ribosome biogenesis [BR:
senr03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
STMDT2_21991 (yejD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
CDG08355
LinkDB
All DBs
Position
complement(2313598..2314293)
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AA seq
231 aa
AA seq
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MRLDKFIAQQLGVSRAIAGREIRGNRVTVDGDIIKNAAFKLLPEHAVAYDGNPLAQQHGP
RYFMLNKPQGYVCSTDDPDHPTVLYFLDEPVAYKLHAAGRLDIDTTGLVLMTDDGQWSHR
ITSPRHHCEKTYLVTLESPVADDTAAQFAKGVQLHNEKDLTKPATLEVITPVQVRLTISE
GRYHQVKRMFAAVGNRVVELHRERIGAITLDENLAPGEYRPLTEEEIASVG
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
atgcgacttgataaatttatcgctcagcagcttggcgtcagccgcgctattgccgggcgt
gaaattcgtggtaaccgcgttaccgtcgatggcgacatcattaaaaatgcggccttcaaa
ctgctcccagaacatgcggttgcgtatgacggcaatcccttagcgcagcaacacgggcca
cgctattttatgcttaacaagccgcagggatacgtttgttcaaccgatgatcccgatcat
ccaacggtgctgtatttcctggatgagccggtggcgtataagctgcatgccgcaggacgt
ctggatatcgatactaccggtctggtgttaatgacagatgacggtcagtggtcgcaccgc
attacgtcgccgcgccatcactgtgaaaaaacctatctggtgaccctggagtcgccggtg
gccgacgatacggcagcgcaatttgcgaaaggcgtgcagttgcataatgaaaaagatctc
actaaacccgctacgctggaggtgataacacctgtgcaggtccgtctgaccatcagcgaa
ggccgttatcatcaggtgaagcggatgtttgccgcagtaggcaatcgcgttgtggaactg
caccgcgaacggattggcgccattacgctggatgagaatctggctcccggcgagtaccgc
ccgttgactgaagaagaaatcgccagcgtcggctaa
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