Salmonella enterica subsp. enterica serovar Typhimurium DT2: STMDT2_27841
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Entry
STMDT2_27841 CDS
T02869
Symbol
sipB
Name
(GenBank) pathogenicity island 1 effector protein
KO
K13285
invasin B
Organism
senr
Salmonella enterica subsp. enterica serovar Typhimurium DT2
Pathway
senr05100
Bacterial invasion of epithelial cells
senr05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
senr00001
]
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
STMDT2_27841 (sipB)
05100 Bacterial invasion of epithelial cells
STMDT2_27841 (sipB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
senr02000
]
STMDT2_27841 (sipB)
Transporters [BR:
senr02000
]
Other transporters
Pores ion channels [TC:
1
]
STMDT2_27841 (sipB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SseC
T3SSipB
Goodbye
Get2_like
DUF2096_N
Motif
Other DBs
NCBI-ProteinID:
CDG08939
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All DBs
Position
complement(2988110..2989891)
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AA seq
593 aa
AA seq
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MVNDASSISRSGYTQNPRLAEAAFEGVRKNTDFLKAADKAFKDVVATKAGDLKAGTKSGE
SAINTVGLKPPTDAAREKLSSEGQLTLLLGKLMTLLGDVSLSQLESRLAVWQAMIESQKE
MGIQVSKEFQTALGEAQEATDLYEASIKKTDTAKSVYDAATKKLTQAQNKLQSLDPADPG
YAQAEAAVEQAGKEATEAKEALDKATDATVKAGTDAKAKAEKADNILTKFQGTANAASQN
QVSQGEQDNLSNVARLTMLMAMFIEIVGKNTEESLQNDLALFNALQEGRQAEMEKKSAEF
QEETRKAEETNRIMGCIGKVLGALLTIVSVVAAVFTGGASLALAAVGLAVMVADEIVKAA
TGVSFIQQALNPIMEHVLKPLMELIGKAITKALEGLGVDKKTAEMAGSIVGAIVAAIAMV
AVIVVVAVVGKGAAAKLGNALSKMMGETIKKLVPNVLKQLAQNGSKLFTQGMQRITSGLG
NVGSKMGLQTNALSKELVGNTLNKVALGMEVTNTAAQSAGGVAEGVFIKNASEALADFML
ARFAMDQIQQWLKQSVEIFGENQKVTAELQKAMSSAVQQNADASRFILRQSRA
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atggtaaatgacgcaagtagcattagccgtagcggatatacccaaaatccgcgcctcgct
gaggcggcttttgaaggcgttcgtaagaacacggactttttaaaagcggcggataaagct
tttaaagatgtggtggcaacgaaagcgggcgaccttaaagccggaacaaagtccggcgag
agcgctattaatacggtgggtctaaagccgcctacggacgccgcccgggaaaaactctcc
agcgaagggcaattgacattactgcttggcaagttaatgaccctactgggcgatgtttcg
ctgtctcaactggagtctcgtctggcggtatggcaggcgatgattgagtcacaaaaagag
atggggattcaggtatcgaaagaattccagacggctctgggagaggctcaggaggcgacg
gatctctatgaagccagtatcaaaaagacggataccgccaagagtgtttatgacgctgcg
accaaaaaactgacgcaggcgcaaaataaattgcaatcgctggacccggctgaccccggc
tatgcacaagctgaagccgcggtagaacaggccggaaaagaagcgacagaggcgaaagag
gccttagataaggccacggatgcgacggttaaagcaggcacagacgccaaagcgaaagcc
gagaaagcggataacattctgaccaaattccagggaacggctaatgccgcctctcagaat
caggtttcccagggtgagcaggataatctgtcaaatgtcgcccgcctcactatgctcatg
gccatgtttattgagattgtgggcaaaaatacggaagaaagcctgcaaaacgatcttgcg
cttttcaacgccttgcaggaagggcgtcaggcggagatggaaaagaaatcggctgaattc
caggaagagacgcgcaaagccgaggaaacgaaccgcattatgggatgtatcgggaaagtc
ctcggcgcgctgctaaccattgtcagcgttgtggccgctgtttttaccggtggggcgagt
ctggcgctggctgcggtgggacttgcggtaatggtggccgatgaaattgtgaaggcggcg
acgggagtgtcgtttattcagcaggcgctaaacccgattatggagcatgtgctgaagccg
ttaatggagctgattggcaaggcgattaccaaagcgctggaaggattaggcgtcgataag
aaaacggcagagatggccggcagcattgttggtgcgattgtcgccgctattgccatggtg
gcggtcattgtggtggtcgcagttgtcgggaaaggcgcggcggcgaaactgggtaacgcg
ctgagcaaaatgatgggcgaaacgattaagaagttggtgcctaacgtgctgaaacagttg
gcgcaaaacggcagcaaactctttacccaggggatgcaacgtattactagcggtctgggt
aatgtgggtagcaagatgggcctgcaaacgaatgccttaagtaaagagctggtaggtaat
accctaaataaagtggcgttgggcatggaagtcacgaataccgcagcccagtcagccggt
ggtgttgccgagggcgtatttattaaaaatgccagcgaggcgcttgctgattttatgctc
gcccgttttgccatggatcagattcagcagtggcttaaacaatccgtagaaatatttggt
gaaaaccagaaggtaacggcggaactgcaaaaagccatgtcttctgcggtacagcaaaat
gcggatgcttcgcgttttattctgcgccagagtcgcgcataa
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