Salmonella enterica subsp. enterica serovar Typhimurium DT2: STMDT2_28281
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Entry
STMDT2_28281 CDS
T02869
Symbol
truD
Name
(GenBank) tRNA pseudouridine synthase D
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
senr
Salmonella enterica subsp. enterica serovar Typhimurium DT2
Brite
KEGG Orthology (KO) [BR:
senr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
senr03016
]
STMDT2_28281 (truD)
Enzymes [BR:
senr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
STMDT2_28281 (truD)
Transfer RNA biogenesis [BR:
senr03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
STMDT2_28281 (truD)
Prokaryotic type
STMDT2_28281 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
CDG08983
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All DBs
Position
complement(3028216..3029265)
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AA seq
349 aa
AA seq
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MTEFDNLTWLHGKPQGSGLLKANPEDFVVVEDLGFTPDGEGEHILLRILKNGCNTRFVAD
ALAKFLKIHAREVSFAGQKDKHAVTEQWLCARVPGKEMPDFSAFQLEGCKVLEYARHKRK
LRLGALKGNAFTLVLREISDRRDVETRLQAIRDGGVPNYFGAQRFGIGGSNLQGALRWAQ
SNAPVRDRNKRSFWLSAARSALFNQIVHQRLKKPDFNQVVDGDALQLAGRGSWFVATSEE
LPELQRRVDEKELMITASLPGSGEWGTQRAALAFEQDAIAQETVLQSLLLREKVEASRRA
MLLYPQQLSWNWWDDVTVELRFWLPAGSFATSVVRELINTMGDYAHIAE
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgacagagtttgacaatctcacctggctgcacggaaaaccacaaggtagcggattgctg
aaagcgaatccggaagattttgtggtggttgaagatttaggctttacgccggatggtgaa
ggcgagcacattttgctgcgtattttgaaaaacggttgcaatacccgttttgtcgctgac
gcgctggcgaaattcctgaaaattcacgctcgcgaagtgagctttgccgggcaaaaagat
aaacacgccgttaccgagcagtggctgtgcgcgcgcgtgccggggaaagagatgcccgat
ttcagcgcctttcagttggaaggttgtaaagtgctggaatacgcgcgtcacaagcgtaag
ctgcgtttaggcgcgctgaaaggcaatgcctttactctggtgttgcgtgaaataagcgat
cgccgcgatgtcgaaacacgattgcaggcgattcgcgatggcggcgtgccgaactatttt
ggtgcacaacgattcggcattggcggcagcaacttgcagggcgcgctgcgctgggcgcaa
agtaacgcgccggtgcgcgatcgcaataaacgcagtttttggttgtcggcggcgcgtagc
gcgttgtttaatcaaattgttcaccagcggctgaagaaaccagactttaatcaagttgtt
gacggcgatgcgctacaattagcggggcgtggaagctggttcgtcgcgacatctgaagaa
ctgcctgaattgcagcgccgggtagacgaaaaagagctgatgattacagcgtcgttgccg
ggcagcggagagtggggaacacagcgtgcggcgctggcgtttgagcaagatgccattgcc
caggaaacggtgttgcaatcgctgttgctgcgcgaaaaagtagaggcgtcgcgcagagcg
atgctgctttatccgcaacaattaagctggaactggtgggatgacgttaccgtcgagtta
cgtttctggctgcccgcaggcagttttgccaccagcgtagtaagggaactgatcaacaca
atgggtgattatgcgcatattgctgagtaa
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