Salmonella enterica subsp. enterica serovar Typhimurium DT2: STMDT2_39361
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Entry
STMDT2_39361 CDS
T02869
Symbol
ydeW
Name
(GenBank) putative regulatory protein
KO
K11531
lsr operon transcriptional repressor
Organism
senr
Salmonella enterica subsp. enterica serovar Typhimurium DT2
Pathway
senr02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
senr00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
STMDT2_39361 (ydeW)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
senr03000
]
STMDT2_39361 (ydeW)
Transcription factors [BR:
senr03000
]
Prokaryotic type
Other transcription factors
Others
STMDT2_39361 (ydeW)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sugar-bind
MarR_2
Sigma70_r4
HTH_Crp_2
HTH_24
HTH_37
DUF7343
HTH_23
MarR
HTH_IclR
Sigma70_r4_2
Crp
wHTH-PRTase_assc
Motif
Other DBs
NCBI-ProteinID:
CDG10091
LinkDB
All DBs
Position
complement(4240850..4241809)
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AA seq
319 aa
AA seq
DB search
MSDNTLVSDYGMCEEEQVARIAWFYYHDGLTQSEISERLGLTRLKVSRLLEKGHQSGIIR
VQINSRFEGCLEYENALRNHFALQNIRVLPALPDADIGLRLGIGAAHMLMESLRPQQLLA
VGFGEATMTTLKRLSGFISAQQIRLVTLSGGVGPYMTGIGQLDAACSVSIMPAPLRASSQ
EIACTLRNENSVRDVMLTAQAADAAIVGIGAINQKDQASILKSGYITQGEQLMIGRKGAV
GDILGYFFDAHGEIIPDIKIHNELIGLKLNSLSTIPTVIGVAGGEQKAEAIIAAMRGNYI
NALVTDQKTAGKIIQIIEK
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgagcgataatacgttggtatctgattatggaatgtgcgaagaagagcaggtggcgcgt
attgcctggttctactatcacgatggattgacgcagagtgaaatcagcgagcgtctgggg
ctaacccggctaaaggtttctcgtctgctggagaaagggcatcagtccggtattattcgc
gtacaaatcaactcccgcttcgaagggtgtcttgagtatgaaaatgccttgcgcaaccac
ttcgcattgcagaatatccgcgtgctgccggcattacccgatgccgatattggtctgcgc
ttaggaatcggcgccgcccatatgttgatggagtcactgcggccacagcaactgctggcc
gtcggctttggcgaagccacgatgaccacattaaaacgcctcagcggatttatctcggcg
caacaaatccgactggtcacgttatccggcggcgtggggccgtatatgaccggaataggc
cagcttgatgccgcttgtagcgtaagtattatgcccgcgccgctgcgcgcatcatcgcag
gaaattgcctgcacgctgcgcaatgaaaatagcgtgcgggatgtgatgctcacagcgcaa
gctgccgatgccgccatcgtggggattggggcaattaaccagaaagatcaagccagtatc
ttaaaatccggttatatcactcagggtgaacaactcatgattggccgcaaaggcgcagta
ggcgatattctgggctatttttttgatgctcatggcgaaattattccagacatcaaaatc
cataacgaattaattggcctgaagttaaattcactttccacgatcccaaccgtgattggc
gtcgccggcggcgaacaaaaagcagaagctattattgccgctatgcgcggtaactatatc
aatgcactggttaccgatcagaaaaccgcagggaaaataattcaaattattgaaaaataa
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