Salmonella enterica subsp. enterica serovar Agona 24249: Q786_06100
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Entry
Q786_06100 CDS
T02944
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
sens
Salmonella enterica subsp. enterica serovar Agona 24249
Brite
KEGG Orthology (KO) [BR:
sens00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sens03016
]
Q786_06100
Enzymes [BR:
sens01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
Q786_06100
Transfer RNA biogenesis [BR:
sens03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
Q786_06100
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNAseD_HRDC_C
HRDC
Motif
Other DBs
NCBI-ProteinID:
AHB43952
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All DBs
Position
1283824..1284939
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AA seq
371 aa
AA seq
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MIETDDALASLCEAVRACPAIALDTEFVRTRTYYPQLGLIQLFDGANVALIDPLGISDWS
PLKAVLRDTGITKFLHAGSEDLEVFLNAFGELPEPLIDTQILAAFCGRPLSWGFAAMVEE
YTGVALDKSESRTDWLARPLSERQCEYAAADVWYLLPIAKKLMIETEAAGWLPAALDECR
LMQQRRQEIQAPEEAWRDITNAWQLRTRQLACLQLLADWRLRKARERDMAVNFVVREENL
WAVARYMPGSLGELDSLGLSGSEIRFHGKTLISLVAKAQALPEEALPEPLLNLMDMPGYR
KAFKAIKALVAEVSASHHVSGELLASRRQINQLLNWHWKLKPQNGQPELISGWRAELMAE
KLTLLLQEYPR
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgattgaaacggacgatgcgctggcgagcctgtgtgaggctgtccgcgcatgtccggct
attgctttagatacggaatttgtccgtacccgcacctattacccgcagttaggattgatc
cagttatttgacggggcaaatgtcgccctgatcgatccgctcggcatcagcgactggtcg
ccgttaaaagcggtgctgcgcgatacgggaatcaccaaatttctgcacgcgggtagcgaa
gatctggaagtatttctgaatgcgtttggcgaactgccggaacccctgattgatacgcaa
attctggcggcgttttgcgggcgtccgctgtcgtggggttttgcggcgatggtagaagag
tatacgggcgtggcgctggataaaagcgaatctcgtaccgactggttagcccggccttta
agcgagcgtcagtgtgaatacgcggcggcggatgtctggtatctgttaccgatcgccaaa
aagctgatgattgaaactgaagccgcaggatggctgcctgccgcgcttgatgaatgccga
ttgatgcagcagcgtcgtcaggagattcaggcgccggaagaggcatggcgggatatcact
aatgcctggcaactgcgtacccgccagttagcctgtctgcaacttttagctgactggcgg
ctgcgtaaggcgcgtgagcgcgatatggcggtgaactttgttgtgcgtgaagaaaacctg
tgggcggtcgcgcgttatatgccgggcagtctcggtgagctggatagcctggggctttcc
ggcagcgagattcgttttcacggcaagacgttgatatcgctggtggcgaaagcacaggcg
ttaccggaagaggcattgccggagcccctgttgaatctgatggacatgccgggctatcgc
aaagcgtttaaggccatcaaagcgctggtggcggaggtgagcgcgtcgcatcacgtcagc
ggcgagctactggcatcgcgtcggcagattaatcagttgcttaactggcactggaaatta
aaaccgcaaaatgggcaaccggaattgatttccggctggcgcgccgaactgatggcggag
aagttaactcttctgttgcaggagtacccgcgttaa
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