Salmonella enterica subsp. enterica serovar Agona 24249: Q786_15980
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Entry
Q786_15980 CDS
T02944
Name
(GenBank) RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
sens
Salmonella enterica subsp. enterica serovar Agona 24249
Pathway
sens03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sens00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Q786_15980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sens03019
]
Q786_15980
03009 Ribosome biogenesis [BR:
sens03009
]
Q786_15980
Enzymes [BR:
sens01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Q786_15980
Messenger RNA biogenesis [BR:
sens03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Q786_15980
Ribosome biogenesis [BR:
sens03009
]
Prokaryotic type
rRNA helicases
Q786_15980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
DeaD_C
ResIII
CMS1
AAA_22
Cas3-like_C_2
DRTGG
Motif
Other DBs
NCBI-ProteinID:
AHB45825
LinkDB
All DBs
Position
complement(3329018..3330958)
Genome browser
AA seq
646 aa
AA seq
DB search
MMSYVDWPPLILRHTYYMAEFETTFADLGLKAPILEALTDLGYEKPSPIQAECIPHLLGG
RDVLGMAQTGSGKTAAFSLPLLNNLDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMRG
VNVVALYGGQRYDVQLRALRQGPQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLR
MGFIEDVETIMAQIPEGHQTALFSATMPEAIRRITRRFMKEPQEVRIQSSVTTRPDISQS
YWTVWGMRKNEALVRFLEAEDFDAAIIFVRTKNATLEVAEALERSGYNSAALNGDMNQAL
REQTLERLKDGRLDILIATDVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAG
RALLFVENRERRLLRNIERTMKLTIPEVELPNAELLGKRRLEKFAAKVQQQLESSDLDQY
RALLAKIQPSAEGEELDLETLAAALLKMAQGERPLILPPDAPMRPKREFRDRDDRGPRDR
NDRGPRGDREERPRRERRDVGDMQLYRIEVGRDDGVEVRHIVGAIANEGDISSRYIGNIK
LFASHSTIELPKGMPGEVLQHFTRTRILNKPMNMQLLGDAVPHAGGERRGGGRSFSGERR
EGGRNFSGERREGGRGDGRRFSGERRESRGPRRDDSTGRRRFGGDA
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgatgagttatgtagactggccgccattaattttgaggcacacgtactacatggctgaa
ttcgaaaccacttttgcagatctggggctgaaggctcctatccttgaagcccttaccgat
ctgggttacgaaaaaccatctccaatccaggcagagtgcattccgcatctgctgggcggt
cgcgacgtgctgggcatggcccagaccggtagcggcaaaaccgcagcgttctctttaccg
ctgctcaacaatcttgatcctgagctgaaggcacctcagattctggtgctggcgccgacc
cgcgaactggcggtacaggttgccgaagccatgacggatttctctaaacacatgcgcggc
gtaaacgtggttgccctgtacggcggtcagcgttatgacgtgcagttacgcgccctgcgt
caggggccgcagatcgttgtcggtacgccgggacgtctgcttgatcacttaaaacgcggc
accctcgacctctctaaactgagtggtctggtgctggatgaagccgacgaaatgctgcgt
atgggcttcatcgaagacgttgaaactattatggcgcagatcccggaaggtcatcagacc
gctctgttctccgccaccatgccggaagcgattcgtcgcattacccgccgctttatgaaa
gagccgcaggaagtgcgcattcagtccagcgtgactacccgtcctgacatcagccagagc
tactggactgtctggggtatgcgtaaaaacgaagcgctggtgcgtttcctggaagcggaa
gactttgatgcggcgattatcttcgtacgtaccaaaaacgcgaccctggaagtagcagaa
gctctggaacgtagcggctacaacagcgccgcgttgaatggcgatatgaaccaggcgctg
cgtgagcagactctggagcgcctgaaagatggtcgtctggacatcctgatcgctaccgac
gttgcggcacgtggtctggacgttgaacgtatcagcctggtggtgaactacgatatcccg
atggattccgagtcctacgttcaccgtatcggtcgtaccggccgtgcgggtcgcgccggt
cgcgcgctgctgttcgttgagaaccgcgagcgtcgtctgctgcgcaacatcgaacgcacc
atgaagctgaccattccggaagtggaactgccgaacgcagaactgctgggtaaacgccgt
ctggaaaaattcgccgcgaaagttcagcagcaactggaaagcagcgatctggatcagtac
cgtgcgctgctggcgaaaatccagccgtctgctgaaggtgaagagctggatctcgaaacg
ctggctgccgcactgctgaaaatggcgcagggcgagcgtccgctgattctgccgccggat
gcgccgatgcgtcctaagcgtgaattccgtgaccgtgatgaccgtggtccgcgcgatcgt
aatgaccgtggcccgcgtggcgaccgggaagaacgtccgcgtcgtgaacgtcgtgacgtt
ggcgatatgcagttataccgcattgaagtgggccgtgatgacggcgttgaagttcgtcat
atcgtgggcgctatcgctaacgaaggcgacatcagcagccgttacattggtaacattaag
ctgttcgcgtctcactccaccatcgagctgccgaaaggtatgccgggcgaagtgctccag
cacttcacgcgtacccgcattctgaacaagccgatgaatatgcagctgttgggtgatgcg
gttccgcacgcgggcggcgaacgtcgcggcggtggtcgtagcttcagtggcgaacgtcgt
gaaggcggtcgtaatttcagcggcgaacgtcgtgaaggtggtcgtggtgatggtcgtcgc
ttcagcggcgagcgtcgtgaaagccgtggtccgcgtcgtgatgactctaccggtcgccgt
cgtttcggcggtgatgcgtaa
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