Salmonella enterica subsp. enterica serovar Typhi Ty21a: TY21A_05405
Help
Entry
TY21A_05405 CDS
T02648
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
sent
Salmonella enterica subsp. enterica serovar Typhi Ty21a
Brite
KEGG Orthology (KO) [BR:
sent00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sent03016
]
TY21A_05405
Enzymes [BR:
sent01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
TY21A_05405
Transfer RNA biogenesis [BR:
sent03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
TY21A_05405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNAseD_HRDC_C
HRDC
Motif
Other DBs
NCBI-ProteinID:
AGK66667
LinkDB
All DBs
Position
1144394..1145509
Genome browser
AA seq
371 aa
AA seq
DB search
MIETDDALASLCEAVRACPAIALDTEFVRTRTYYPQLGLIQLFDGANVALIDPLGISDWS
PLKAVLRDTGITKFLHAGSEDLEVFLNAFGELPEPLIDTQILAAFCGRPLSWGFASMVEE
YTGVALDKSESRTDWLARPLSERQCEYAAADVWYLLPIAKKLMIETEAAGWLPAALDECR
LMQQRRQEIQAPEEAWRDITNAWQLRTRQLACLQLLADWRLRKARERDMAVNFVVREENL
WAVARYMPGSLGELDSLGLSGSEIRFHGKTLISLVAKAQALPEEALPEPLLNLMDMPGYR
KAFKAIKALVAEVSASHHVSGELLASRRQINQLLNWHWKLKPQNGQPELISGWRAELMAE
KLTLLLQEYSL
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgattgaaacggacgatgcgctggcgagcctgtgtgaggctgtccgcgcatgtccggct
attgctttagatacggaatttgtccgtacccgcacctattacccgcagttaggattgatc
cagttatttgacggggcaaatgtcgccctgatcgatccgctcggcatcagcgactggtcg
ccgttaaaagcggtgttgcgcgatacgggaatcaccaaatttctgcacgcgggtagcgaa
gatctggaagtatttctgaatgcgtttggcgaactgccggaacctctgattgatacgcaa
attctggcggcgttttgcgggcgtccgctgtcgtggggttttgcgtcgatggtagaagag
tatacgggcgtggcgctggacaaaagcgagtctcgtaccgactggttagcccggccttta
agcgaacgtcagtgtgaatacgcggcggcggatgtctggtatctgttaccgatcgccaaa
aagctgatgattgaaactgaagccgcaggatggctgcctgccgcgcttgatgaatgccga
ttgatgcagcagcgtcgtcaggagattcaggcgccggaagaagcatggcgggatatcacc
aatgcctggcaactgcgtactcgccagttagcctgtctgcaacttttagctgactggcgg
ctacgtaaggcgcgtgagcgcgatatggcggtgaactttgttgtgcgtgaagaaaacctg
tgggcggtcgcgcgttatatgccgggcagtctcggtgagctggatagcctggggctttcc
ggcagcgagattcgttttcacggcaagacgttgatatcgctggtggcgaaagcacaggcg
ctaccggaagaggcattgccggaacccctgttgaatctgatggacatgccgggctatcgc
aaagcgtttaaggccatcaaagcgctagtggcggaggtgagcgcgtcgcatcacgtcagc
ggcgagctactggcatcgcgtcggcagattaatcagttgcttaactggcactggaaatta
aaaccgcaaaatgggcaaccggaattgatttccggctggcgcgccgaactgatggcggag
aagttaactcttctgttgcaggagtattcgctttaa
DBGET
integrated database retrieval system
