Salmonella enterica subsp. enterica serovar Typhi Ty21a: TY21A_10510
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Entry
TY21A_10510 CDS
T02648
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
sent
Salmonella enterica subsp. enterica serovar Typhi Ty21a
Pathway
sent03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sent00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TY21A_10510
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sent03019
]
TY21A_10510
Enzymes [BR:
sent01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
TY21A_10510
Messenger RNA biogenesis [BR:
sent03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
TY21A_10510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
HI1480
UvrD-helicase
P-loop_SecA
Utp25_C
Motif
Other DBs
NCBI-ProteinID:
AGK67647
LinkDB
All DBs
Position
complement(2130325..2131692)
Genome browser
AA seq
455 aa
AA seq
DB search
MSFDSLGLNPDILRAIAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL
QHLITHQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVSINPQMM
KLRGGVDVLVATPGRLLDLEHQNAVKLDQIEILVLDEADRMLDMGFIHDIRRVLAKLPAK
RQNLLFSATFSDDIKALAEKLLRNPLEIEVARRNTASEQVTQHVHFVDKKRKRELLSQMI
GQGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV
ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI
EKLLKKEIPRITTPGYEPDPSIKAEPIQNGRQQRGGGGGGRGRGQNQGGAGRSQQPRRQD
SGAAKAKPKPRTGEGKPAGDKARPPRRPRRITPAQ
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttgattccctgggattaaaccctgatatcctgcgcgccattgccgagcagggt
taccgtgaacctacccctattcagcaacaggcgattcccgccgtgctggaaggccgcgat
ctgatggctagcgcccagaccggaaccggtaaaacggcgggttttaccctgccattgttg
cagcatctgattacccatcagccgcacgctaaaggtcgtcgcccggtacgtgcgttgatc
ctcacgccaacccgcgagctggcggcgcaaattggtgaaaacgtcagagattacagtaaa
tatctcaatattcgctcgctggtggtatttggcggcgtaagcattaatccgcagatgatg
aaactgcgcggcggcgtggatgtgctggtggcgacgccgggacgtctgctcgacctggaa
catcaaaatgccgtgaagctggatcagattgagattctggtactggatgaagccgaccgt
atgctggatatgggcttcattcacgacattcgtcgcgtgctggcgaaactgccggcgaag
cgtcagaatctgctgttctccgccacgttctccgacgacatcaaagcgctcgccgaaaag
ctgttgcgcaacccgctggaaatcgaagtggcgcgccgcaacacggcctcagagcaggtg
acgcagcacgtgcactttgtcgataaaaaacgcaaacgtgaactgttgtcgcagatgatt
ggccagggcaactggcagcaggtgttggtcttcacccgcaccaagcatggcgcgaaccat
ctggcggaacagcttaataaagacggtattcgcagcgcggcgatccacggtaataaatcg
cagggcgcacgtacccgcgcgctggccgattttaaatccggcgatattcgcgtgctggtg
gcgacggatattgcggcgcgtggtctggatattgaagagctgccgcacgtggtcaactat
gaactgccgaacgtgccggaagattatgtacaccgtattggccgtaccggtcgcgcggcg
gcaactggcgaggcgctgtcgctggtctgtgttgacgagcataaactgttgcgtgatatc
gaaaaattgctgaaaaaagagatcccacgcattacgacgccgggctatgagccggacccg
tcgattaaagcggagccgattcagaacggccgtcagcagcgcggcggcggtggcggcggt
cgtggacgcggacaaaatcaggggggagcggggcgcagtcagcagccgcgacgtcaggat
agcggggcggcgaaggcgaaaccaaaaccgcgcacaggcgaggggaaacccgctggcgac
aaagcacgtccgccgcgtcgcccgcgcagaatcacgcctgcccagtaa
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