Salmonella enterica subsp. enterica serovar Typhi Ty21a: TY21A_14500
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Entry
TY21A_14500 CDS
T02648
Symbol
rumA
Name
(GenBank) 23S rRNA 5-methyluridine methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
sent
Salmonella enterica subsp. enterica serovar Typhi Ty21a
Brite
KEGG Orthology (KO) [BR:
sent00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sent03009
]
TY21A_14500 (rumA)
Enzymes [BR:
sent01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
TY21A_14500 (rumA)
Ribosome biogenesis [BR:
sent03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
TY21A_14500 (rumA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRAM
Methyltransf_31
Methyltransf_25
PCMT
RrnaAD
Methyltransf_11
MTS
Cons_hypoth95
Methyltr_RsmB-F
Methyltransf_4
TRM5-TYW2_MTfase
Methyltransf_23
FtsJ
Ubie_methyltran
Methyltrans_SAM
Methyltransf_15
Methyltransf_32
PrmA
Motif
Other DBs
NCBI-ProteinID:
AGK68408
LinkDB
All DBs
Position
complement(2946600..2947895)
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AA seq
431 aa
AA seq
DB search
MAQFYSAKRRVTTRQIITVKVNDLDSFGQGVARHNGKALFIPGLLPEESAEVIITEDKKQ
FARARVSRRLNDSPERETPRCPHFGVCGGCQQQHVGIDLQQRSKSAALARLMKHEVNDII
AGASWGYRRRARLSLNCPPDKPLQMGFRKAGSSDIVNVEQCPVLAPQLEALLPRIRACLA
SLHGTRHLGHVELVQAGSGTLMILRHTAPLSAADKEKLERFSHSEGLSLFLAPFSEILET
VSGEAPWYDSHGLRLTFSPRDFIQVNEAVNQQMVARALEWLDVRAEDRVLDLFCGMGNFT
LPLATRAASVVGVEGVQALVEKGRENAIRNGLHNVTFFHENLEEDVTKQPWAKNGFDKVL
LDPARAGATGVMRHIIKLKPIRIVYVSCNPATLARDSEALVNAGYEVTRLAMLDMFPHTG
HLESMVLFERM
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaattctactctgcaaaacggcgcgtgacgacgcgtcagatcataaccgttaaa
gtcaatgacctcgattcatttggtcagggcgtagcccgtcataacggaaaggcgctgttt
atccccggtttattgcctgaggaaagcgcagaagtcattattacagaagataaaaagcaa
tttgcccgcgcacgcgtttcgcgccgtttgaatgatagcccggaacgagaaacgccgcgc
tgcccgcattttggcgtctgcggcggttgtcagcaacagcatgtcggcatcgacctgcaa
caacgcagcaaaagcgcggcgctggcgcgtttaatgaaacatgaggtgaatgacatcatc
gccggcgcgtcctggggttatcggcgtcgtgcgcggttaagtctgaattgcccgccggat
aaaccgctgcaaatgggatttcgcaaagcgggttccagcgatatcgtcaatgtcgaacag
tgccccgttttggcgccccagcttgaagcattgctgccccgcatcagggcgtgtctggcg
agtttacacggcacccgacatcttgggcatgttgagctggtacaggcgggaagcggtacg
ctgatgattctgcgccataccgcgccattaagtgcggcggataaagaaaaactggaacgc
ttttcgcattctgagggattgtctctgttcctggcgccgtttagcgagatactggaaacg
gtatctggcgaagcgccctggtatgattcgcacggcttacgtttaaccttcagtccgcga
gactttattcaggttaatgaggcggtaaaccagcaaatggtcgcccgcgcgctggagtgg
cttgatgtgcgcgccgaggatcgtgtcctggatctgttctgcggaatggggaattttacg
ctaccgctggcaacgcgcgcggcaagcgtggtaggggttgagggcgttcaggcgctggta
gaaaaaggccgtgaaaacgccatccgcaatggtttacataatgtgacattcttccacgag
aacctggaggaagatgtcacgaagcagccgtgggcgaaaaacggctttgacaaagtctta
ctcgatcctgcgcgtgcgggggctacaggagtgatgcgacatattataaaattaaaacct
attcgcattgtttatgtatcctgtaacccggcgacgctggcgcgcgatagtgaagcgctg
gtcaatgcgggatatgaggttacgcgtttagcgatgctcgacatgttcccgcacacagga
catctggaatcaatggttctgttcgagcgcatgtaa
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