Salmonella enterica subsp. enterica serovar Typhi Ty21a: TY21A_16235
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Entry
TY21A_16235 CDS
T02648
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
sent
Salmonella enterica subsp. enterica serovar Typhi Ty21a
Brite
KEGG Orthology (KO) [BR:
sent00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sent03016
]
TY21A_16235 (truB)
Enzymes [BR:
sent01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
TY21A_16235 (truB)
Transfer RNA biogenesis [BR:
sent03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
TY21A_16235 (truB)
Prokaryotic type
TY21A_16235 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
AGK68733
LinkDB
All DBs
Position
complement(3293350..3294294)
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AA seq
314 aa
AA seq
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MSRPRRRGRDIHGVLLLDKPQGMSSNDVLQKVKRIYNANRAGHTGALDPLATGMLPICLG
EATKFSQYLLDSDKRYRVIARLGQRTDTSDADGQIVQERPVTFSAEQLASALETFRGDIE
QIPSMYSALKYQGRKLYEYARQGIEVPREARPITVYELLFIRHEGNELELEVHCSKGTYI
RTIIDDLGEKLGCGAHVTYLRRLTVSKYPVDRMVTLEHLQTLVAQAEQQGVPAAQLLDPL
LMPMDSPASDYPVVNLPLTSSVYFKNGNPVRTTGAPLKGLVRVTEGEDDKFIGMGEIDDE
GRVAPRRLVVEYPA
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgtcctcgtcgtcgtggccgcgacattcacggcgttctgttgctggataagccg
cagggtatgtccagcaatgacgtgctgcagaaagttaagcgcatctacaatgccaaccgc
gccgggcataccggcgcgttggacccgctggcgaccggcatgttgccgatttgcctcggc
gaagcgacaaaattttcgcagtacttgctggattctgacaaacgctatcgtgttattgcc
cgtctggggcagcgcacagatacctctgacgccgatggtcaaatcgtgcaggagcgtccg
gtgactttcagcgctgagcagcttgcgagcgcgctggagacctttcgtggggatatcgaa
cagattccctcgatgtattcggcgctgaagtatcagggcaggaagctgtacgaatatgcc
cgccagggtatcgaagtgccgcgcgaagcccgcccgattaccgtctatgagctgctgttt
attcgccatgaaggtaacgagctggagctggaagttcattgctccaaaggcacctatatt
cgcactattattgatgatttaggtgagaaactgggctgtggcgcgcacgtaacgtacctg
cgtcgtctgacggtcagcaagtatccggtggatcgtatggtgacgctggagcacttgcag
acgctggtagcacaggcggaacagcagggcgttccggcggcgcagttgctcgatccatta
ttgatgccaatggatagtccggcttcggactatcctgttgttaatctgccgttaacatct
tcggtatacttcaaaaatggcaacccggttcgtaccacgggcgcgccgttgaagggactg
gttcgtgtgacggaaggtgaagacgataaatttatcggtatgggcgaaattgacgacgaa
ggccgtgtcgcgcctcgtcggctggtagtagagtacccggcgtaa
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