Salmonella enterica subsp. enterica serovar Typhi Ty21a: TY21A_16980
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Entry
TY21A_16980 CDS
T02648
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
sent
Salmonella enterica subsp. enterica serovar Typhi Ty21a
Pathway
sent00300
Lysine biosynthesis
sent00470
D-Amino acid metabolism
sent01100
Metabolic pathways
sent01110
Biosynthesis of secondary metabolites
sent01120
Microbial metabolism in diverse environments
sent01230
Biosynthesis of amino acids
Module
sent_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
sent00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
TY21A_16980 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
TY21A_16980 (dapF)
Enzymes [BR:
sent01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
TY21A_16980 (dapF)
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
CntK_N
Motif
Other DBs
NCBI-ProteinID:
AGK68880
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Position
complement(3452065..3452889)
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AA seq
274 aa
AA seq
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MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLSDRHLGVGFDQLLVVEPPYDPELDFHY
RIFNADGSEVSQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLSVTEDELVRVNMGE
PNFEPAQVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDNVDTAAVETLGPVLE
SHERFPERANIGFMQVVRREHIRLRVYERGAGETRACGSGACAAVAVGIQQGLLAEEVRV
ELPGGRLDIAWKGPGHPLYMTGPAAHIYDGFIHL
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgcaattctctaaaatgcatggccttggcaacgattttatggtcgtcgacgcggtaacg
cagaatgtctttttttcgccggaactgattcgtcggctatccgacagacacttgggcgta
gggttcgatcagctgctggtggttgagccgccctatgatcctgagttggactttcattac
cgcatcttcaacgccgacggcagtgaagtctcgcagtgcggcaatggcgcgcgctgtttc
gcgcgatttgttcgcctgaaagggctaaccaataaacgcgatattcgggtcagtaccgcg
aatggccggatggtactgagcgtcacggaagatgaactggtgcgggtgaacatgggggag
ccaaactttgaacccgcgcaggtgccttttcgcgccaacaaagcggaaaagacgtatatt
atgcgagcggcggaacagaccatactgtgcggcgtggtttcaatgggcaatccgcactgt
gtcattcaggttgataacgtcgacacggcggccgttgaaacactggggccggttctggaa
agccatgagcgttttccggaacgcgccaacattggttttatgcaggttgtaagacgtgag
catatccggctgcgagtctatgaacgcggcgcaggggagacccgcgcgtgcggcagcggc
gcgtgcgctgccgttgccgtggggattcagcaggggctgctggctgaagaagtacgcgtg
gaattaccgggcggtcggctggatatcgcctggaaaggtccgggtcatccgttatacatg
actggtccggcggcacatatctacgacggatttatccatttatga
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