Salmonella enterica subsp. enterica serovar Typhi Ty21a: TY21A_18995
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Entry
TY21A_18995 CDS
T02648
Name
(GenBank) putative NtrC-family transcriptional regulator
KO
K17473
sigma-54 dependent transcriptional regulator, dga operon transcriptional activator
Organism
sent
Salmonella enterica subsp. enterica serovar Typhi Ty21a
Brite
KEGG Orthology (KO) [BR:
sent00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sent03000
]
TY21A_18995
Transcription factors [BR:
sent03000
]
Prokaryotic type
Helix-turn-helix
Other families
TY21A_18995
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
PRD
Sigma54_activ_2
AAA_5
AAA_22
AAA
NACHT
AAA_16
Mg_chelatase
AAA_2
AAA_14
IstB_IS21
AAA_24
AAA_7
nSTAND3
AAA_25
DUF5669
Motif
Other DBs
NCBI-ProteinID:
AGK69258
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Position
3859095..3861734
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AA seq
879 aa
AA seq
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MTAWQSKAVAARSIFWHRQALETLLGRQLEESEREVRSVADVLPHEEHYAPDDPFTSLIG
YDRSLRDAVEKGRAAVLYPHGLHVLLTGPSGVGKTFFAELMHRFACEQASGAIPPLVYFN
CAEYAHNPELLSSHLFGHRQGAFTGANEHKTGLVEQADGGYLLLDEVHRLSYEGQEKLFS
ILDKGEYRPLGVSSQPRSISVRLICATTEPVGSALLRTFQRRIQVCIDLPGIRQRSVEEQ
IELIVGFLQRESRKIERTVSIDKPLLLWLLNKPLEGNIGQLKSDIQFLCAQAWASGMTEH
NDTLQLDKRLAEMSVNPTPEQRLLVDTLFDGKARLNIDARTLPALKTSLATGAEIEESDL
FYSFLTREYVNLRNSNVPPAETLAILKNKLSSIFEYGLYSRDSVAHPPRYGDQIEERVTL
LIGCVEQVLGFSLPENLVNPLRKHFLALIGYVQRGLIPQLYSSSLILDRCKDEYDNATLL
CRKINELLHIQCPATEVVWLCLFLKECRHYRQRIDASPDCGVILIAHGATTATSQAQYVN
RVLERELFSAIDMPFEQSVHDTLETLTQMIQTRQYRRLILLVGIGSLIHFGSTISKLFQI
DVLLMPNITLTSLLEVGLDLSYETSDLPQLTALLQSKNIPCQLCTPQQENGGKVLVISCI
TGMGTAEKIKKVLEESFGELMSQDTRMVILDYNEVRSLERVQQALNASERLAGIVGTFQP
GLPDIPFISLEELFSEQGPELVLSLLTPDLSNAERRLEMERSAMRFISALTMESIINHIS
VLNPQRILKEMEGVFNHLTSSLSLKPSRQVTLRFLIHCCCMVERIVINRKPLQMALERQP
NLDARAFSVIKSAFLPIEDAYAIRLSDAEYFYIYELLYS
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atgacggcctggcaatcaaaagccgtggccgcccggtctattttttggcatcgccaggcg
ctggaaacgttgctgggacgtcagctggaagagtctgaacgcgaggtgcggtcggtggcg
gatgtgctgccgcatgaagagcattacgcgcccgacgatccgtttaccagcctgattggt
tacgatcgcagcctgcgcgatgcggtagaaaaaggccgtgcggcggtgctctatccgcac
ggtttacacgttctgcttaccgggccgtccggcgtcggtaaaaccttttttgcggaactg
atgcaccgtttcgcctgtgaacaggcgagcggcgctatcccgccgctggtctactttaac
tgcgcggaatacgcccataacccggaactgctctcctcgcatctgtttggtcatcggcag
ggggcgtttaccggcgcgaatgaacataaaacaggcctcgtggagcaggcggacggtggt
tatctgttgctggacgaggtgcaccgtctgtcttatgaagggcaggaaaagctgttttct
attctggataaaggcgagtaccgtccgctcggcgtgagcagccagccgcgatcaatttcg
gtacgcctgatttgcgccactaccgaaccggtcgggtcggcgctgttacgtactttccag
cggcgtattcaggtatgcattgatttgccgggcattcgccagcgctccgttgaagaacag
atcgaactgatcgtggggttcttacagcgggaaagccgcaaaatagaacgcacggtcagc
attgataaaccgttgttgctctggttgctgaataaacccctggaaggcaatatcggtcag
ctaaaaagcgatattcagtttctttgcgctcaggcgtgggcatcgggaatgaccgagcat
aacgacacgctacagctggataaacggctggcggagatgtcggttaacccgacgccggaa
cagcgtctattggtggatactctgtttgacggtaaagcgcggctaaatatagacgcgcgc
acgctgcccgcattgaagacgtcgctggcgaccggggcggaaattgaagagagcgacctc
ttttacagcttcctgacgcgcgagtatgttaatttgcgcaacagtaacgtccccccggcg
gagacgctggcgatcctgaaaaataaactcagctcgatttttgaatacggtctctatagc
cgcgacagcgtggcgcatccgccgcgctatggcgaccagattgaagagcgcgtgacgctg
ctgattggctgcgtagagcaggtgttgggcttttcgctgccggaaaatctggttaaccca
ctgcgtaaacacttcctggcgctgataggctacgtgcagcgcggcctgatcccgcagctt
tactcttccagtttgatcctggatcgctgcaaagacgaatatgacaacgccacgctgctg
tgtcggaaaatcaacgaactgctgcatatacagtgtccggcgacggaagtggtctggcta
tgcctgttcctgaaagagtgccgccattatcgtcagcgtatcgatgccagccccgactgc
ggggtcattttgatcgctcacggcgcgaccaccgccaccagtcaggcgcaatatgtcaac
cgcgtgctggagcgcgagctgttcagcgccatcgacatgccgtttgaacagtcggtgcat
gacacgctggaaacgctgacccaaatgattcaaacccgccaatatcggcggcttatcctg
ttggtgggcatcggttcattgatccatttcggcagcaccatcagtaaattattccagata
gatgttttgctcatgccgaatatcacgctgaccagtctactggaagtcgggctggattta
agctatgaaaccagcgacttaccacagttgacggcgctcctgcagagtaaaaatatcccc
tgccagctttgtacgccgcagcaggagaacggcggcaaagtgctggtcatctcctgtatt
accggcatgggaacggcggaaaaaatcaaaaaggtgctggaggagagctttggcgaactg
atgtcgcaggacaccaggatggtgatccttgattataacgaggtacgaagtctggagcgc
gttcagcaggcattgaatgccagcgagcggctggcggggattgtcggcactttccagccg
gggctgccggatattccgtttatttcgctggaagagcttttctccgaacaagggccggaa
ctggtgttgagcctgttaacgcccgatctgtccaacgctgaacgccgtctggagatggag
cgcagcgcgatgcgctttatcagcgcgctaacgatggagagcatcatcaaccatatttct
gtgcttaacccgcagcgtattctgaaagagatggagggcgtttttaaccatctgacgtct
tcgctttccctgaaaccaagccgccaggtgacactgcgcttcctgatccactgctgctgt
atggtagagcgtattgtgattaaccgaaaaccgttacagatggcgctggaacgtcagccg
aatctggacgcgcgcgcgtttagtgtcatcaaatccgcttttctgccgatcgaagacgcg
tacgccatccgtttatcggatgcggaatatttttatatctacgaactgctctatagctaa
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